RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 IL12AP29459 219 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 HTR3AP46098 478 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ANXA11P50995 505 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 MAP2K6P52564 334 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 SLC18A1P54219 525 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ATP5J2P56134 94 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 UFM1P61960 85 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 RPS4XP62701 263 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 H3F3AP84243 136 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ETFDHQ16134 617 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF672Q499Z4 452 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 LRRC74BQ6ZQY2 392 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ARFGAP2Q8N6H7 521 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 TRIML2Q8N7C3 387 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF563Q8TA94 476 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ARL5BQ96KC2 179 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 TRIM2Q9C040 744 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 GRIP2Q9C0E4 1043 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 SLC38A1Q9H2H9 487 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 LAMP3Q9UQV4 416 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 ZANQ9Y493 2812 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 C9JVG2 144 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 GPR171O14626 319 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 HDAC3O15379 428 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF208O43345 1280 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 SNNO75324 88 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 C1QCP02747 245 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 WDR4P57081 412 aaKnown RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 HPCAP84074 193 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 BSPH1Q075Z2 132 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 PPA1Q15181 289 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 GPAT3Q53EU6 434 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 FBXW9Q5XUX1 488 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 RNF130Q86XS8 419 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF100Q8IYN0 542 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF433Q8N7K0 673 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ANKFN1Q8N957 763 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 GLB1L3Q8NCI6 653 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 PIGXQ8TBF5 258 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 SMAP2Q8WU79 429 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 CNOT9Q92600 299 aaKnown RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF775Q96BV0 537 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 ZHX1-C8orf76Q96EF9 292 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 PANX1Q96RD7 426 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 MTHFD2LQ9H903 347 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 THAP1Q9NVV9 213 aa15.21■□□□□ 0.03
VPS9D1-203ENST00000563798 USF3Q68DE3 2245 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 OR5H1A6NKK0 313 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 CLDN24A6NM45 220 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 TRPC5OSA6NMA1 111 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 LYZL6O75951 148 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 CHRM4P08173 479 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 SOD3P08294 240 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 GGT1P19440 569 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 RYKP34925 604 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 SYPL1Q16563 259 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 HHATQ5VTY9 493 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 ALKBH2Q6NS38 261 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 ATG4DQ86TL0 474 aaPredicted RBP15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 MUCL1Q96DR8 90 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 MAELQ96JY0 434 aaKnown RBP15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 OR52E6Q96RD3 313 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 INPP5KQ9BT40 448 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 CENPHQ9H3R5 247 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 TMEM181Q9P2C4 612 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 MALT1Q9UDY8 824 aa15.2■□□□□ 0.02
VPS9D1-203ENST00000563798 SLCO1B7G3V0H7 640 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 SMAD7O15105 426 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 CLOCKO15516 846 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 EIF1BO60739 113 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 TFPIP10646 304 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 NTF4P34130 210 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 CDKN2CP42773 168 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 SLC1A3P43003 542 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 IDH2P48735 452 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 MAPK11Q15759 364 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 PGGHGQ32M88 737 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 ZNF621Q6ZSS3 439 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 DTX2Q86UW9 622 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 KBTBD8Q8NFY9 601 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 NEUROG1Q92886 237 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 APH1AQ96BI3 265 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 TRMT61AQ96FX7 289 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 RADILQ96JH8 1075 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 OR11A1Q9GZK7 315 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 WDR55Q9H6Y2 383 aaPredicted RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 OSGIN1Q9UJX0 560 aa15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 NOSIPQ9Y314 301 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-203ENST00000563798 TMED7-TICAM2A0A0A6YYA0 188 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 SHISA9B4DS77 424 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 AP3D1O14617 1153 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 IL6P05231 212 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 DBIP07108 87 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 ZCCHC18P0CG32 403 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 EPHA3P29320 983 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 POLR2HP52434 150 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 MVDP53602 400 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 NME5P56597 212 aa15.18■□□□□ 0.02
VPS9D1-203ENST00000563798 GNA13Q14344 377 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms