RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 KIAA0895LQ68EN5 471 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 C1orf94Q6P1W5 598 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPRIN3Q6ZVF9 776 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF677Q86XU0 584 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PTOV1Q86YD1 416 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 HPS6Q86YV9 775 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CMTM8Q8IZV2 173 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PRSS35Q8N3Z0 413 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TEX26Q8N6G2 289 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FAM98AQ8NCA5 519 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 UBA3Q8TBC4 463 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPR148Q8TDV2 347 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF473Q8WTR7 871 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ING5Q8WYH8 240 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC35C1Q96A29 364 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 C10orf90Q96M02 699 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ERGIC2Q96RQ1 377 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 IL4I1Q96RQ9 567 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TTYH2Q9BSA4 534 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LRRC1Q9BTT6 524 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TRAF4Q9BUZ4 470 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPR174Q9BXC1 333 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ELOVL4Q9GZR5 314 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 KLHL31Q9H511 634 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 RANBP3Q9H6Z4 567 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SEC61A2Q9H9S3 476 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPN2Q9H9Y4 310 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF701Q9NV72 531 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TESQ9UGI8 421 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PRG3Q9Y2Y8 225 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TNFRSF18Q9Y5U5 241 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MAD1L1Q9Y6D9 718 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 EVPLQ92817 2033 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZSWIM8A7E2V4 1837 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LCTP09848 1927 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 A0A1B0GUS0 222 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MED19A0JLT2 244 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GOLGA8JA6NMD2 632 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ARHGEF33A8MVX0 844 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ANKRD63C9JTQ0 380 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ITGB1BP1O14713 200 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LAMTOR5O43504 91 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LDB2O43679 373 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 EFNA2O43921 213 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 NXPH2O95156 264 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 STSP08842 583 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ADORA3P0DMS8 318 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MSNP26038 577 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CD1CP29017 333 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 STX2P32856 288 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 AHRP35869 848 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ID1P41134 155 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 OR3A3P47888 321 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 KCNJ3P48549 501 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PPP2CBP62714 309 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PPP2CAP67775 309 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MAPRE2Q15555 327 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CTF1Q16619 201 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CLLU1OSQ5K130 101 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SAPCD1Q5SSQ6 148 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 THEM4Q5T1C6 240 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 OTUD3Q5T2D3 398 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 DMKNQ6E0U4 476 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 OR4C11Q6IEV9 310 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC27A4Q6P1M0 643 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 DHRS11Q6UWP2 260 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 UNQ6126/PRO20091Q6UXV3 157 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF562Q6V9R5 426 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TMEM184AQ6ZMB5 413 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PAGE2Q7Z2X7 111 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PEG10Q86TG7 708 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SATL1Q86VE3 508 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TRIM69Q86WT6 500 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 NUDCD3Q8IVD9 361 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MARVELD2Q8N4S9 558 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LRRC75AQ8NAA5 344 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ICA1LQ8NDH6 482 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SPATA22Q8NHS9 363 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 HTR3CQ8WXA8 447 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 Q96MF0 132 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MED10Q9BTT4 135 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 C9orf16Q9BUW7 83 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 UBXN6Q9BZV1 441 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PRO3102Q9H379 93 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 IKZF5Q9H5V7 419 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 NTN4Q9HB63 628 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ADAP2Q9NPF8 381 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 INPP5EQ9NRR6 644 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LYARQ9NX58 379 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FLRT3Q9NZU0 649 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC17A7Q9P2U7 560 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FZR1Q9UM11 496 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 COQ4Q9Y3A0 265 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 HES2Q9Y543 173 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PUS1Q9Y606 427 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FKBP7Q9Y680 259 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TRIP12Q14669 1992 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms