RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ATP6V1B2P21281 511 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 IGFBP5P24593 272 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 CASP14P31944 242 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 GCKP35557 465 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 DEKP35659 375 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 OR3A4PP47883 348 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 QARSP47897 775 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RPL29P47914 159 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RPL34P49207 117 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 STARP49675 285 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 DAP3P51398 398 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PRRX1P54821 245 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PKNOX1P55347 436 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RPL23AP62750 156 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 KLRC3Q07444 240 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 BCL2L1Q07817 233 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 QRICH1Q2TAL8 776 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 GLYR1Q49A26 553 aaPredicted RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 CTSL3PQ5NE16 218 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC25A30Q5SVS4 291 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 DCST2Q5T1A1 773 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RNASEKQ6P5S7 137 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC137Q6PK04 289 aaKnown RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ENPP6Q6UWR7 440 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 GCNT7Q6ZNI0 430 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PGAP1Q75T13 922 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 UTS2BQ765I0 119 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ECHDC2Q86YB7 292 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 C9orf40Q8IXQ3 194 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 CATSPER1Q8NEC5 780 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 OR52H1Q8NGJ2 320 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 KCNG3Q8TAE7 436 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 AGR3Q8TD06 166 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 IL1F10Q8WWZ1 152 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 TECTBQ96PL2 329 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 OR5M11Q96RB7 305 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PANX1Q96RD7 426 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PLIN2Q99541 437 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC39A3Q9BRY0 314 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PPDPFQ9H3Y8 114 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RBKSQ9H477 322 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 AZI2Q9H6S1 392 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ANKRA2Q9H9E1 313 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ZFP14Q9HCL3 533 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 KLHL28Q9NXS3 571 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 WRAP73Q9P2S5 460 aaPredicted RBP2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF639Q9UID6 485 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 STAP1Q9ULZ2 295 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 CHD4Q14839 1912 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 IGKV6D-41A0A0C4DH26 115 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 IQANK1A0A1B0GTG1 560 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 FAM240BA0A1B0GVZ2 78 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TCRBV9S1A1TA0A576 114 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 HEATR9A2RTY3 570 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ZNF705EA8MWA4 302 aaPredicted RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 A8MXQ7 604 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 GPAA1O43292 621 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 MBTPS2O43462 519 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CXCL13O43927 109 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TOM1O60784 492 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 GJB5O95377 273 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 P04436 131 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 RNH1P13489 461 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CHMLP26374 656 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ANXA13P27216 316 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CD1CP29017 333 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CD80P33681 288 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 UGT1A5P35504 534 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 FDFT1P37268 417 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 DUSP3P51452 185 aaPredicted RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 PRMT2P55345 433 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CXCL6P80162 114 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 MRPS11P82912 194 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CSTF1Q05048 431 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 KLRB1Q12918 225 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ASAH1Q13510 395 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 GK3PQ14409 553 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 GRB7Q14451 532 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SSX2Q16385 188 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ALKBH6Q3KRA9 238 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TIMM50Q3ZCQ8 353 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 BCL7AQ4VC05 210 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 C1orf185Q5T7R7 199 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ARMC12Q5T9G4 340 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 BAIAP2L2Q6UXY1 529 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ZNF600Q6ZNG1 722 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SERINC5Q86VE9 423 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TGIF2LXQ8IUE1 241 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 NRMQ8IXM6 262 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 C15orf54Q8N8G6 183 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ACOT4Q8N9L9 421 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CCDC148Q8NFR7 591 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 OR52K2Q8NGK3 314 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 RHOXF1Q8NHV9 184 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TYMSOSQ8TAI1 123 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 MAGEE2Q8TD90 523 aaPredicted RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SLC2A14Q8TDB8 520 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms