RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 HIST1H2AAQ96QV6 131 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SNX18Q96RF0 628 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ARRDC1-AS1Q9H2J1 176 aa7□□□□□ -1.29
TCF4-216ENST00000562680 TCEAL2Q9H3H9 227 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 SOX17Q9H6I2 414 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ALG5Q9Y673 324 aa7□□□□□ -1.29
TCF4-216ENST00000562680 F8W036 122 aa7□□□□□ -1.29
TCF4-216ENST00000562680 FGF17O60258 216 aa7□□□□□ -1.29
TCF4-216ENST00000562680 HTR3BO95264 441 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CD46P15529 392 aa7□□□□□ -1.29
TCF4-216ENST00000562680 EDNRAP25101 427 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MAP3K8P41279 467 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CEBPGP53567 150 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ZNF124Q15973 351 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ZNF385BQ569K4 471 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PAN3Q58A45 887 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 SLC35F1Q5T1Q4 408 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PODNL1Q6PEZ8 512 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CFAP77Q6ZQR2 320 aa7□□□□□ -1.29
TCF4-216ENST00000562680 UEVLDQ8IX04 471 aa7□□□□□ -1.29
TCF4-216ENST00000562680 IZUMO1Q8IYV9 350 aa7□□□□□ -1.29
TCF4-216ENST00000562680 GPER1Q99527 375 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SPNS1Q9H2V7 528 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SEC61A2Q9H9S3 476 aa7□□□□□ -1.29
TCF4-216ENST00000562680 LIN28AQ9H9Z2 209 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 GLTPQ9NZD2 209 aa7□□□□□ -1.29
TCF4-216ENST00000562680 A0A1B0GTL3 188 aa7□□□□□ -1.29
TCF4-216ENST00000562680 IGLV3-19P01714 112 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CDK1P06493 297 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PNLIPP16233 465 aa7□□□□□ -1.29
TCF4-216ENST00000562680 TNFRSF1BP20333 461 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CTXN1P60606 82 aa7□□□□□ -1.29
TCF4-216ENST00000562680 HSF2Q03933 536 aa7□□□□□ -1.29
TCF4-216ENST00000562680 BTN1A1Q13410 526 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SPCS2Q15005 226 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PYDC2Q56P42 97 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ALG10Q5BKT4 473 aa7□□□□□ -1.29
TCF4-216ENST00000562680 TSSK4Q6SA08 328 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PEG10Q86TG7 708 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 PLCZ1Q86YW0 608 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SLC35F3Q8IY50 421 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PARP8Q8N3A8 854 aa7□□□□□ -1.29
TCF4-216ENST00000562680 OR4D9Q8NGE8 314 aa7□□□□□ -1.29
TCF4-216ENST00000562680 OR51G2Q8NGK0 314 aa7□□□□□ -1.29
TCF4-216ENST00000562680 OR10Z1Q8NGY1 313 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SLC25A43Q8WUT9 341 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 SLC25A37Q9NYZ2 338 aa7□□□□□ -1.29
TCF4-216ENST00000562680 KCMF1Q9P0J7 381 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ASB4Q9Y574 426 aa7□□□□□ -1.29
TCF4-216ENST00000562680 IDSB3KWA1 339 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SEC14L5O43304 696 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SORBS2O94875 1100 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 ZNF20P17024 532 aa7□□□□□ -1.29
TCF4-216ENST00000562680 GM2AP17900 193 aa7□□□□□ -1.29
TCF4-216ENST00000562680 HNF1AP20823 631 aa7□□□□□ -1.29
TCF4-216ENST00000562680 IDUAP35475 653 aa7□□□□□ -1.29
TCF4-216ENST00000562680 POLR2HP52434 150 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 CDH15P55291 814 aa7□□□□□ -1.29
TCF4-216ENST00000562680 VLDLRP98155 873 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PLP2Q04941 152 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MAP4K2Q12851 820 aa7□□□□□ -1.29
TCF4-216ENST00000562680 DUSP8Q13202 625 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ERV3-1Q14264 604 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MAD2L1BPQ15013 274 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 CCNJQ5T5M9 372 aa7□□□□□ -1.29
TCF4-216ENST00000562680 FBXO42Q6P3S6 717 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ARL9Q6T311 187 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MBOAT2Q6ZWT7 520 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PRSS42Q7Z5A4 293 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MARCH9Q86YJ5 346 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ZNF433Q8N7K0 673 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 SLC16A11Q8NCK7 471 aa7□□□□□ -1.29
TCF4-216ENST00000562680 OR9Q2Q8NGE9 314 aa7□□□□□ -1.29
TCF4-216ENST00000562680 OR14L1PQ8NHC6 308 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ST8SIA2Q92186 375 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ARHGAP9Q9BRR9 750 aa7□□□□□ -1.29
TCF4-216ENST00000562680 DCSTAMPQ9H295 470 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CENPMQ9NSP4 180 aa7□□□□□ -1.29
TCF4-216ENST00000562680 GRIP1Q9Y3R0 1128 aa7□□□□□ -1.29
TCF4-216ENST00000562680 UTS2O95399 124 aa7□□□□□ -1.29
TCF4-216ENST00000562680 LGI1O95970 557 aa7□□□□□ -1.29
TCF4-216ENST00000562680 MT-ND2P03891 347 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ERGP11308 486 aa7□□□□□ -1.29
TCF4-216ENST00000562680 TLE3Q04726 772 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ILKQ13418 452 aa7□□□□□ -1.29
TCF4-216ENST00000562680 RUNX2Q13950 521 aa7□□□□□ -1.29
TCF4-216ENST00000562680 SPHARQ15513 63 aa7□□□□□ -1.29
TCF4-216ENST00000562680 TSTQ16762 297 aaKnown RBP7□□□□□ -1.29
TCF4-216ENST00000562680 COX20Q5RI15 118 aa7□□□□□ -1.29
TCF4-216ENST00000562680 PMS2CLQ68D20 193 aa7□□□□□ -1.29
TCF4-216ENST00000562680 WDR74Q6RFH5 385 aaPredicted RBP7□□□□□ -1.29
TCF4-216ENST00000562680 UNQ6126/PRO20091Q6UXV3 157 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CDH26Q8IXH8 852 aa7□□□□□ -1.29
TCF4-216ENST00000562680 NXPE2Q96DL1 559 aa7□□□□□ -1.29
TCF4-216ENST00000562680 LRRC46Q96FV0 321 aa7□□□□□ -1.29
TCF4-216ENST00000562680 CCDC74BQ96LY2 380 aa7□□□□□ -1.29
TCF4-216ENST00000562680 RXFP3Q9NSD7 469 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ALKBH4Q9NXW9 302 aa7□□□□□ -1.29
TCF4-216ENST00000562680 ZNF701M0R085 212 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms