RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DEFB107AQ8IZN7 70 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 C9orf106Q8NAJ2 232 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 TNIP2Q8NFZ5 429 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 OR6T1Q8NGN1 323 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 ZNF563Q8TA94 476 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
CDH1-204ENST00000562118 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
CDH1-204ENST00000562118 KCTD14Q9BQ13 255 aaPredicted RBP12.04□□□□□ -0.48
CDH1-204ENST00000562118 ZNF559Q9BR84 538 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 TRIM2Q9C040 744 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
CDH1-204ENST00000562118 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
CDH1-204ENST00000562118 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 TAS2R1Q9NYW7 299 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 Q9UFV3 132 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 SH3BGRL2Q9UJC5 107 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 BAG5Q9UL15 447 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 HDGFL3Q9Y3E1 203 aa12.04□□□□□ -0.48
CDH1-204ENST00000562118 ICE1Q9Y2F5 2266 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TMED7-TICAM2A0A0A6YYA0 188 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TMEM72A0PK05 275 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 B2RBV5 119 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TNFSF11O14788 317 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 AGFG2O95081 481 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 IL18BPO95998 194 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 IFNA14P01570 189 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 THY1P04216 161 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 CRHP06850 196 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 H3F3AP84243 136 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 HOXC5Q00444 222 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TFF3Q07654 80 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 PMPCAQ10713 525 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 CEACAM7Q14002 265 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 CDSNQ15517 529 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 ZNF239Q16600 458 aaKnown RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 CYBRD1Q53TN4 286 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 ZNF613Q6PF04 617 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 RINLQ6ZS11 566 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 RNF128Q8TEB7 428 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 RND1Q92730 232 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 SLC38A4Q969I6 547 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 CPNE4Q96A23 557 aaPredicted RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 TM9SF2Q99805 663 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 SRXN1Q9BYN0 137 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 POTEKPQ9BYX7 375 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 SERINC1Q9NRX5 453 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 ZNF629Q9UEG4 869 aaPredicted RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 PRPF19Q9UMS4 504 aaKnown RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 RNF6Q9Y252 685 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TRAPPC4Q9Y296 219 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 TMED7Q9Y3B3 224 aa12.03□□□□□ -0.48
CDH1-204ENST00000562118 SPIN1Q9Y657 262 aaPredicted RBP12.03□□□□□ -0.48
CDH1-204ENST00000562118 IGKV1D-42A0A075B6H8 117 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 A0A1B0GWA3 101 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 HSPB2A8KAH6 182 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 M0R3H8 397 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 EIF1AYO14602 144 aaKnown RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 SEC14L5O43304 696 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 TNFSF13O75888 250 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 SEMG1P04279 462 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 FCGR2AP12318 317 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 CHRNB4P30926 498 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 AGFG1P52594 562 aaKnown RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 SMSP52788 366 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 COPZ1P61923 177 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 SRYQ05066 204 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 EGR4Q05215 589 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 BNIP1Q12981 228 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 HSPB2Q16082 182 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 TMEM176BQ3YBM2 270 aaPredicted RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 ABLIM2Q6H8Q1 611 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 ULK3Q6PHR2 472 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 TMPPEQ6ZT21 453 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 RANBP3LQ86VV4 465 aaPredicted RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 UBQLNLQ8IYU4 475 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 LILRB4Q8NHJ6 448 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 FNDC9Q8TBE3 224 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 STK35Q8TDR2 534 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 ASB5Q8WWX0 329 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 FIG4Q92562 907 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 ARL5BQ96KC2 179 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 TRIB1Q96RU8 372 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 CDRT15Q96T59 188 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 TMEM185BQ9H7F4 350 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 GP6Q9HCN6 339 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 DCAF13Q9NV06 445 aaKnown RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.49
CDH1-204ENST00000562118 ING1Q9UK53 422 aaPredicted RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 KLF2Q9Y5W3 355 aaPredicted RBP12.02□□□□□ -0.49
CDH1-204ENST00000562118 A0A087WUJ7 227 aa12.01□□□□□ -0.49
CDH1-204ENST00000562118 ZC3H12DA2A288 527 aaKnown RBP12.01□□□□□ -0.49
CDH1-204ENST00000562118 SLC22A20A6NK97 555 aa12.01□□□□□ -0.49
CDH1-204ENST00000562118 FTCDNL1E5RQL4 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms