RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 IMPDH2P12268 514 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 PTNP21246 168 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 CRYGSP22914 178 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 IL32P24001 234 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 APOBEC1P41238 236 aaKnown RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 RAC3P60763 192 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 EPS8Q12929 822 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 RNPS1Q15287 305 aaKnown RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 RGNQ15493 299 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 STK11Q15831 433 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 DEFB113Q30KQ7 82 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 C9orf135Q5VTT2 229 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 GRINAQ7Z429 371 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 SERPINA11Q86U17 422 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 MSRB3Q8IXL7 192 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 ZNF100Q8IYN0 542 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 NEUROG1Q92886 237 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 PLPPR2Q96GM1 343 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 CCDC28BQ9BUN5 200 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 IKZF5Q9H5V7 419 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 GLRX2Q9NS18 164 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 KLHL9Q9P2J3 617 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 CHST2Q9Y4C5 530 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 ACANP16112 2415 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 ITPR3Q14573 2671 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 A0A096LPI6 279 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 A0A0G2JND7 137 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 A0A1W2PR80 420 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 C5orf58C9J3I9 102 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 ETV2O00321 342 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 KLF4O43474 513 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 CYTIPO60759 359 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 GCM2O75603 506 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 ZCCHC18P0CG32 403 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 CD53P19397 219 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 FPR1P21462 350 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 RPS4Y1P22090 263 aaKnown RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 LOXP28300 417 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 AQP1P29972 269 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 CRISP3P54108 245 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 FOXG1P55316 489 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 LRRC74AQ0VAA2 488 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 FOXD4Q12950 439 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 GNA13Q14344 377 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 SQLEQ14534 574 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 OR7A5Q15622 319 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 LIN52Q52LA3 116 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 ZNF311Q5JNZ3 666 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 GCNT6Q5T4J0 391 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 BLOC1S3Q6QNY0 202 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 P3H2Q8IVL5 708 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 GABRG1Q8N1C3 465 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 UBE2J2Q8N2K1 259 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 WFDC11Q8NEX6 87 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 NINJ1Q92982 152 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 MAGEB18Q96M61 343 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 FOXC2Q99958 501 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 RSPO3Q9BXY4 272 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 CACYBPQ9HB71 228 aaKnown RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 EXOSC3Q9NQT5 275 aaKnown RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 VAPAQ9P0L0 249 aa8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 SPIN1Q9Y657 262 aaPredicted RBP8.4□□□□□ -1.06
NSMCE1-203ENST00000562039 ARID1AO14497 2285 aa8.4□□□□□ -1.07
NSMCE1-203ENST00000562039 USF3Q68DE3 2245 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 DSCAMO60469 2012 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CDHR4A6H8M9 788 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM247A6NEH6 219 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CLOCKO15516 846 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 AKR7A3O95154 331 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 TGDSO95455 350 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 GUSBP08236 651 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CD99P14209 185 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 HOXB9P17482 250 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CBLP22681 906 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 IGHV1-2P23083 117 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CXCR1P25024 350 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 ADSLP30566 484 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 NTF4P34130 210 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 ACAA2P42765 397 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC1A3P43003 542 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 OR3A2P47893 321 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 POLR2HP52434 150 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CSNK2A1P68400 391 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CEACAM7Q14002 265 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SELPLGQ14242 412 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 LARS2Q15031 903 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 TAB1Q15750 504 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 GLIPR1L2Q4G1C9 344 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SFRP5Q5T4F7 317 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SPNS3Q6ZMD2 512 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF704Q6ZNC4 412 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 MSANTD1Q6ZTZ1 278 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 BHLHA15Q7RTS1 189 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 GALNT5Q7Z7M9 940 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 MTDHQ86UE4 582 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 COMTD1Q86VU5 262 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms