RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SLC1A3P43003 542 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 CSNK2A1P68400 391 aaPredicted RBP13.78□□□□□ -0.2
CCDC113-203ENST00000561517 LARS2Q15031 903 aaKnown RBP13.78□□□□□ -0.2
CCDC113-203ENST00000561517 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 STAC2Q6ZMT1 411 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 NUFIP2Q7Z417 695 aaKnown RBP13.78□□□□□ -0.2
CCDC113-203ENST00000561517 STK32CQ86UX6 486 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 BBS10Q8TAM1 723 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 NINJ1Q92982 152 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 MAL2Q969L2 176 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 ARL5BQ96KC2 179 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 PSD2Q9BQI7 771 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 SPATA9Q9BWV2 254 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 ADAM19Q9H013 955 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 KLHL28Q9NXS3 571 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 KLHL9Q9P2J3 617 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 ITGB1BP2Q9UKP3 347 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 IFT52Q9Y366 437 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 HDGFL3Q9Y3E1 203 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 CHST2Q9Y4C5 530 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 HIVEP1P15822 2718 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 AKAP9Q99996 3911 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 DSCAMO60469 2012 aa13.78□□□□□ -0.2
CCDC113-203ENST00000561517 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF208O43345 1280 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 DNPH1O43598 174 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 PGM3O95394 542 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 PMS2P2O95744 297 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ARAFP10398 606 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 TFPIP10646 304 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 UQCRBP14927 111 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 GPX2P18283 190 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 KLK2P20151 261 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 CRYGSP22914 178 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 TACR3P29371 465 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 POLR2HP52434 150 aaKnown RBP13.77□□□□□ -0.21
CCDC113-203ENST00000561517 MAP2K6P52564 334 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 EXOC3L2Q2M3D2 409 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ABLIM2Q6H8Q1 611 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 DLEU7Q6UYE1 221 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 TFAP2EQ6VUC0 442 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 C22orf34Q6ZV56 151 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 MTDHQ86UE4 582 aaKnown RBP13.77□□□□□ -0.21
CCDC113-203ENST00000561517 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 MED18Q9BUE0 208 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 KLHL4Q9C0H6 718 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 OR11A1Q9GZK7 315 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 LIME1Q9H400 295 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 PLEKHF2Q9H8W4 249 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 FANCFQ9NPI8 374 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF226Q9NYT6 803 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 LEF1Q9UJU2 399 aaPredicted RBP13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 ITPR3Q14573 2671 aa13.77□□□□□ -0.21
CCDC113-203ENST00000561517 A0A0G2JND7 137 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 A0A1W2PPR1 153 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 TMEM72A0PK05 275 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF724A8MTY0 619 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 DEFB108AA8MXU0 73 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 SIAH2O43255 324 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 FESP07332 822 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 ETS2P15036 469 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 PPP3CBP16298 524 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 PSMB1P20618 241 aaKnown RBP13.76□□□□□ -0.21
CCDC113-203ENST00000561517 RASGEF1BQ0VAM2 473 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 PDK3Q15120 406 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF550Q7Z398 422 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 GABRG1Q8N1C3 465 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 DPP10Q8N608 796 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 SLC35B4Q969S0 331 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
CCDC113-203ENST00000561517 OR10A4Q9H209 315 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 TMEM38AQ9H6F2 299 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 TRAPPC4Q9Y296 219 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
CCDC113-203ENST00000561517 RAI1Q7Z5J4 1906 aaPredicted RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 IGKV3D-15A0A087WSY6 115 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 GCM2O75603 506 aaPredicted RBP13.75□□□□□ -0.21
CCDC113-203ENST00000561517 CCNA2P20248 432 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 IST1P53990 364 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 CDK6Q00534 326 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 ZNF311Q5JNZ3 666 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 ANKRD34AQ69YU3 496 aa13.75□□□□□ -0.21
CCDC113-203ENST00000561517 WBP2NLQ6ICG8 309 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms