RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 OC90Q02509 493 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 EEF1A2Q05639 463 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 PRKG2Q13237 762 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 MED21Q13503 144 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 GTF2H2Q13888 395 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PTPRCAPQ14761 206 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 OR1C1Q15619 314 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 GGTA1PQ4G0N0 100 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SYTL3Q4VX76 610 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 XKR7Q5GH72 579 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CTSL3PQ5NE16 218 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 FAM69AQ5T7M9 428 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CYB5R2Q6BCY4 276 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SLC25A25Q6KCM7 469 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 GTF2H2CQ6P1K8 395 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 KLHL35Q6PF15 583 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 FAM151BQ6UXP7 276 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 B3GNT6Q6ZMB0 384 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CYHR1Q6ZMK1 362 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 MSANTD1Q6ZTZ1 278 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PLEKHM3Q6ZWE6 761 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 DPPA4Q7L190 304 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 NDUFAF7Q7L592 441 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 LRRC70Q7Z2Q7 622 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 HEATR5AQ86XA9 2040 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 AQP12AQ8IXF9 295 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PIANPQ8IYJ0 282 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 TRAM1L1Q8N609 369 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 HORMAD2Q8N7B1 307 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PACRGLQ8N7B6 248 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 NAXEQ8NCW5 288 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 C16orf52Q8NHV5 167 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CD200R1Q8TD46 325 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 UBTD2Q8WUN7 234 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 RAB40AQ8WXH6 277 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ST8SIA4Q92187 359 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 UBE2E3Q969T4 207 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 AP2M1Q96CW1 435 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 LRRC58Q96CX6 371 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RCN3Q96D15 328 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SPDL1Q96EA4 605 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ELP4Q96EB1 424 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 VPS35Q96QK1 796 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SCN2AQ99250 2005 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 EGFL8Q99944 293 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ECSITQ9BQ95 431 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 OSBPL10Q9BXB5 764 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 FAM192AQ9GZU8 254 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ABCG8Q9H221 673 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RMND5AQ9H871 391 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ACTR8Q9H981 624 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 BPIFA1Q9NP55 256 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 DECR2Q9NUI1 292 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ARMC1Q9NVT9 282 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 AIG1Q9NVV5 245 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 IRAK4Q9NWZ3 460 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ELOVL5Q9NYP7 299 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 WWOXQ9NZC7 414 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 TMEM181Q9P2C4 612 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 GALPQ9UBC7 116 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PEMTQ9UBM1 199 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SLC23A2Q9UGH3 650 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 LEF1Q9UJU2 399 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 PCTPQ9UKL6 214 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RAB26Q9ULW5 256 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 TMED5Q9Y3A6 229 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 AP4S1Q9Y587 144 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 AP1M2Q9Y6Q5 423 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 FREM1Q5H8C1 2179 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CADP27708 2225 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TRBV5-7A0A0A0MS05 114 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 HYKKA2RU49 373 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GSAPA4D1B5 854 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 OR5K3A6NET4 321 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ZNF814B7Z6K7 855 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GPR89AB7ZAQ6 455 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GFYI3L273 518 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ACOT8O14734 319 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TSPAN4O14817 238 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 DENRO43583 198 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 OR1I1O60431 355 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 NIPSNAP2O75323 286 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RSL1D1O76021 490 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 CLDN7O95471 211 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SOD1P00441 154 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 ADAP00813 363 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CATP04040 527 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 LINC00032P0C843 101 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 GPR89BP0CG08 455 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PRPS1L1P21108 318 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PPIBP23284 216 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 IGFBP5P24593 272 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 CXCR2P25025 360 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 PSMA4P25789 261 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 ABCD3P28288 659 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 SERPINB1P30740 379 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 TNFSF8P32971 234 aa2.88□□□□□ -1.95
SPG11-225ENST00000561391 RPL3P39023 403 aaKnown RBP2.88□□□□□ -1.95
SPG11-225ENST00000561391 ARL1P40616 181 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms