RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CSNK2A1P68400 391 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 ACKR1Q16570 336 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 RPS26P11Q5JNZ5 115 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF836Q6ZNA1 936 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 MSANTD1Q6ZTZ1 278 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 STEAP2Q8NFT2 490 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 LRRC8CQ8TDW0 803 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 ITCHQ96J02 903 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 CCL19Q99731 98 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 RMND5AQ9H871 391 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 TPT1P8Q9HAU6 139 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 TCF7L2Q9NQB0 619 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 DSPPQ9NZW4 1301 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMED7-TICAM2A0A0A6YYA0 188 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 FAM234BA2RU67 622 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF814B7Z6K7 855 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 POLR3GO15318 223 aaPredicted RBP15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 PLAUP00749 431 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 ADAP00813 363 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZCCHC18P0CG32 403 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 SFRP5Q5T4F7 317 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 SLC2A7Q6PXP3 512 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF704Q6ZNC4 412 aaPredicted RBP15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 VRK2Q86Y07 508 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 ADGRG3Q86Y34 549 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 PEX5LQ8IYB4 626 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 KISS1RQ969F8 398 aaPredicted RBP15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 EBF4Q9BQW3 602 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 OR10A4Q9H209 315 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 MTHFD2LQ9H903 347 aaPredicted RBP15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 DLL4Q9NR61 685 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 RLIMQ9NVW2 624 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMED7Q9Y3B3 224 aa15.25■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMEM72A0PK05 275 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF724A8MTY0 619 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 SMPD2O60906 423 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 LYZL6O75951 148 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 PMS2P2O95744 297 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 FPR1P21462 350 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 TACR3P29371 465 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 HOXC12P31275 282 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 STX1BP61266 288 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 NKX6-1P78426 367 aaPredicted RBP15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 EPS8Q12929 822 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 GNA13Q14344 377 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 TAB1Q15750 504 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 Q5PR19 223 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 C20orf204Q6ZNR8 217 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 Q6ZT83 130 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 SLC38A5Q8WUX1 472 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZHX1-C8orf76Q96EF9 292 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMEM19Q96HH6 336 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 PAIP1Q9H074 479 aaKnown RBP15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 OSGIN1Q9UJX0 560 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 HDGFL3Q9Y3E1 203 aa15.24■□□□□ 0.03
CDC42BPB-208ENST00000561271 NIPBLQ6KC79 2804 aaeCLIP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZANQ9Y493 2812 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 CDHR4A6H8M9 788 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 CFAP73A6NFT4 308 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF716A6NP11 495 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 NR5A2O00482 541 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 RAMP1O60894 148 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 NUDT7P0C024 238 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 TFPTP0C1Z6 253 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 GKN3PP0CG01 181 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 UQCRBP14927 111 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 MAGEA8P43361 318 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 HTR3AP46098 478 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 IDH3AP50213 366 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 POLR2HP52434 150 aaKnown RBP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 CRISP3P54108 245 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 NR1H2P55055 460 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 OR2B6P58173 313 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 LIN52Q52LA3 116 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 BHLHA15Q7RTS1 189 aaPredicted RBP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 GALNT5Q7Z7M9 940 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 ATG4DQ86TL0 474 aaPredicted RBP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF100Q8IYN0 542 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 OR52P1PQ8NH57 321 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 DYDC1Q8WWB3 177 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 GTF2H4Q92759 462 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 PIGTQ969N2 578 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 PIP5K1AQ99755 562 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 HDHD5Q9BXW7 423 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 POTEKPQ9BYX7 375 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 CALML5Q9NZT1 146 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 EMC3Q9P0I2 261 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF443Q9Y2A4 671 aaPredicted RBP15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 PCDHB14Q9Y5E9 798 aa15.23■□□□□ 0.03
CDC42BPB-208ENST00000561271 IGKV3D-15A0A087WSY6 115 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZC3H12DA2A288 527 aaKnown RBP15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 FAAHO00519 579 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 IGHV3-9P01782 118 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 IGHV1-2P23083 117 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 SLC1A3P43003 542 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 ITGADQ13349 1161 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms