RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TMED7-TICAM2A0A0A6YYA0 188 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 A0A1B0GVC2 190 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 OR2M5A3KFT3 312 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 FAM166BA8MTA8 275 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 TNFRSF11BO00300 401 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ADAMDEC1O15204 470 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 KLF4O43474 513 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 FZD7O75084 574 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 DEAF1O75398 565 aaPredicted RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 GADD45GO95257 159 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 NUDT14O95848 222 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 LDLRP01130 860 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 GASTP01350 101 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 IGHG3P01860 377 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 GP1BBP13224 206 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 APOBEC1P41238 236 aaKnown RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 OMPP47874 163 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 TAS2R41P59536 307 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 SPIBQ01892 262 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 LY6DQ14210 128 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 TRAM2Q15035 370 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ST3GAL2Q16842 350 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 MICAQ29983 383 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 COLEC12Q5KU26 742 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 GRINAQ7Z429 371 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 P3H2Q8IVL5 708 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 CHERPQ8IWX8 916 aaKnown RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 OR5K1Q8NHB7 308 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ZNF563Q8TA94 476 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 NR4A3Q92570 626 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 PNPLA2Q96AD5 504 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ZBTB8AQ96BR9 441 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 MPP4Q96JB8 637 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ARL5BQ96KC2 179 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 ALPK1Q96QP1 1244 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 PSD2Q9BQI7 771 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 PTDSS2Q9BVG9 487 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 SLC25A18Q9H1K4 315 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 PTGES2Q9H7Z7 377 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 YY1AP1Q9H869 796 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 C20orf141Q9NUB4 165 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 C6orf203Q9P0P8 240 aaPredicted RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 BOKQ9UMX3 212 aaPredicted RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 TMED7Q9Y3B3 224 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 FAM32AQ9Y421 112 aaKnown RBP8.46□□□□□ -1.06
HERC1-206ENST00000559996 PKD1L2Q7Z442 2459 aa8.46□□□□□ -1.06
HERC1-206ENST00000559996 BOD1L1Q8NFC6 3051 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 ZNF407Q9C0G0 2248 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 USP24Q9UPU5 2620 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 E9PQ18 207 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 H0YHG0 523 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 ERVH48-1M5A8F1 160 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 PDLIM1O00151 329 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 DLGAP1O14490 977 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 ZNF208O43345 1280 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 PIP5K1CO60331 668 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 RASAL1O95294 804 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 BAG2O95816 211 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 TP53P04637 393 aaPredicted RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 IMPDH2P12268 514 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 FCGR1AP12314 374 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 ZNF26P17031 533 aaPredicted RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 MAKP20794 623 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 PTNP21246 168 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 FPR1P21462 350 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 TCEA1P23193 301 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 GDF1P27539 372 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 GCKP35557 465 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 STARP49675 285 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 DAPP51397 102 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 POLR2HP52434 150 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 COPZ1P61923 177 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 PRKCDQ05655 676 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 SLC34A1Q06495 639 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 MERTKQ12866 999 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 FOXD4Q12950 439 aaPredicted RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 SLC10A1Q14973 349 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 CTU2Q2VPK5 515 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 NHSL2Q5HYW2 709 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 DCST1Q5T197 706 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 OGFRL1Q5TC84 451 aaPredicted RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 LPCAT4Q643R3 524 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 C1orf94Q6P1W5 598 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 SHQ1Q6PI26 577 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 TRILQ7L0X0 811 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 FGD2Q7Z6J4 655 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 CYP4Z1Q86W10 505 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 RNF113BQ8IZP6 322 aaKnown RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 FAM109AQ8N4B1 249 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 OR9Q2Q8NGE9 314 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 PFN4Q8NHR9 129 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 TMEM239Q8WW34 195 aa8.45□□□□□ -1.06
HERC1-206ENST00000559996 ACOT11Q8WXI4 607 aaPredicted RBP8.45□□□□□ -1.06
HERC1-206ENST00000559996 TMEM234Q8WY98 164 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms