RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DPH7Q9BTV6 452 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 TRIM62Q9BVG3 475 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ANKRD19PQ9H560 264 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 C20orf96Q9NUD7 363 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 SIGLEC8Q9NYZ4 499 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 SLC7A8Q9UHI5 535 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 PITPNC1Q9UKF7 332 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 LOC100506127A0A0U1RQW1 187 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 OR6C65A6NJZ3 312 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 G3V4G9 280 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 K7EQD1 137 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 LSM1O15116 133 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 YKT6O15498 198 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RS1O15537 224 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RAMP3O60896 148 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 ERCC1P07992 297 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 ALOX5P09917 674 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 FOLR2P14207 255 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 PRKACBP22694 351 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 CALML3P27482 149 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 CD1CP29017 333 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RPL4P36578 427 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 DAOAP59103 153 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 ERVK-16P61578 105 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RAB11AP62491 216 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RPS6P62753 249 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 OC90Q02509 493 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 ZNF85Q03923 595 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 TGFBIQ15582 683 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RAB11BQ15907 218 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 KLHL38Q2WGJ6 581 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 Q3ZCU0 254 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 GLYR1Q49A26 553 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 TP53I3Q53FA7 332 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 LIN9Q5TKA1 542 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 WDR25Q64LD2 544 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 C3P1Q6ZMU1 363 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 LINC00523Q86TU6 105 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 SERPINA9Q86WD7 417 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 C11orf53Q8IXP5 236 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 GABRG1Q8N1C3 465 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 FGFRL1Q8N441 504 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 PQLC3Q8N755 202 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 OR4K14Q8NGD5 310 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 OR1L6Q8NGR2 347 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 LILRB4Q8NHJ6 448 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 MAGEE2Q8TD90 523 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 ACMSDQ8TDX5 336 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 ARNTL2Q8WYA1 636 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 UBE2E3Q969T4 207 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 CIDECQ96AQ7 238 aaPredicted RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 ATP6V1G3Q96LB4 118 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 FAM173AQ9BQD7 235 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 IL22Q9GZX6 179 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 SLITRK2Q9H156 845 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 IKZF5Q9H5V7 419 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 NT5DC2Q9H857 520 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 SEC14L4Q9UDX3 406 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 PRPF19Q9UMS4 504 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 SCML2Q9UQR0 700 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 NOSIPQ9Y314 301 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 STARD10Q9Y365 291 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 AK6Q9Y3D8 172 aaKnown RBP2.91□□□□□ -1.94
SPG11-218ENST00000559754 OARD1Q9Y530 152 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 PEX16Q9Y5Y5 336 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 MAP3K19Q56UN5 1328 aa2.91□□□□□ -1.94
SPG11-218ENST00000559754 METP08581 1390 aa2.9□□□□□ -1.94
SPG11-218ENST00000559754 SRRM5B3KS81 715 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 HSBP1L1C9JCN9 74 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 NPIPB9F8W1W9 429 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 K7ERI5 159 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 HIP1O00291 1037 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 FBP2O00757 339 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 TRAFD1O14545 582 aaPredicted RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 TYROBPO43914 113 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 NMT2O60551 498 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 SNAP91O60641 907 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 DIRAS1O95057 198 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 STAMBPO95630 424 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 AP2A1O95782 977 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 HPP00738 406 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 IGFBP1P08833 259 aaPredicted RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 GSTM3P21266 225 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 GNA11P29992 359 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 HNRNPH3P31942 346 aaKnown RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 HSD17B2P37059 387 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 NDST2P52849 883 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 ACLYP53396 1101 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 RPS27AP62979 156 aaKnown RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 PAX5Q02548 391 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 CD300CQ08708 224 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 RAB40BQ12829 278 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 FASTKQ14296 549 aaKnown RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 SYCP1Q15431 976 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 MLF2Q15773 248 aaPredicted RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 KNOP1Q1ED39 458 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms