RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TRIM2Q9C040 744 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 CENPHQ9H3R5 247 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 KLHL9Q9P2J3 617 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 GDF2Q9UK05 429 aaPredicted RBP11.96□□□□□ -0.49
VPS18-203ENST00000558855 RAB21Q9UL25 225 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 GPR45Q9Y5Y3 372 aa11.96□□□□□ -0.49
VPS18-203ENST00000558855 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 IGKV3D-15A0A087WSY6 115 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 TMEM72A0PK05 275 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 DUXAA6NLW8 204 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 ZNF724A8MTY0 619 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 SULT2B1O00204 365 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 SNNO75324 88 aaPredicted RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 TFPIP10646 304 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 RPS4Y1P22090 263 aaKnown RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 RPS4XP62701 263 aaKnown RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 SLC25A3Q00325 362 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 FAPQ12884 760 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 GPAT3Q53EU6 434 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 BHLHB9Q6PI77 547 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 B3GLCTQ6Y288 498 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 DNAJC14Q6Y2X3 702 aaPredicted RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 HOMEZQ8IX15 550 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 ZNF433Q8N7K0 673 aaPredicted RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 BDH2Q9BUT1 245 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
VPS18-203ENST00000558855 KCNK9Q9NPC2 374 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 EXD2Q9NVH0 621 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 CHRNA9Q9UGM1 479 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 BTNL2Q9UIR0 455 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
VPS18-203ENST00000558855 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 RAD51DO75771 328 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 CD3EP07766 207 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 GUSBP08236 651 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 ITGA5P08648 1049 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 KITP10721 976 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 S100A3P33764 101 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
VPS18-203ENST00000558855 ACVR1BP36896 505 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 IDH2P48735 452 aaKnown RBP11.94□□□□□ -0.5
VPS18-203ENST00000558855 KCNJ10P78508 379 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 P2RY6Q15077 328 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 PPA1Q15181 289 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 OR52E4Q8NGH9 312 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 MGARPQ8TDB4 240 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 SMAP2Q8WU79 429 aaPredicted RBP11.94□□□□□ -0.5
VPS18-203ENST00000558855 FBXW5Q969U6 566 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 MDFIQ99750 246 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 PAIP2Q9BPZ3 127 aaKnown RBP11.94□□□□□ -0.5
VPS18-203ENST00000558855 HDHD5Q9BXW7 423 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 POLE3Q9NRF9 147 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 PCDHGB4Q9UN71 923 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 SLC35A3Q9Y2D2 325 aa11.94□□□□□ -0.5
VPS18-203ENST00000558855 HEATR1Q9H583 2144 aaKnown RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 TMED7-TICAM2A0A0A6YYA0 188 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 TMEM120BA0PK00 339 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 AGAP5A6NIR3 686 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 PGM3O95394 542 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 PMS2P2O95744 297 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 PGRP06401 933 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 SLC9B1Q4ZJI4 515 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 MRPL2Q5T653 305 aaKnown RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 ATAD3BQ5T9A4 648 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 ANXA8L1Q5VT79 327 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 DNM1P46Q6ZS02 220 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 GRINAQ7Z429 371 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 GALNT5Q7Z7M9 940 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 VRK2Q86Y07 508 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 ARFGAP2Q8N6H7 521 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 OR9I1Q8NGQ6 314 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 TMEM234Q8WY98 164 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 HSD17B8Q92506 261 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 HTRA1Q92743 480 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 VPS33AQ96AX1 596 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 AURKBQ96GD4 344 aaPredicted RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 OR52B2Q96RD2 323 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 TRAF4Q9BUZ4 470 aaPredicted RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 CXorf56Q9H5V9 222 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 EXOSC3Q9NQT5 275 aaKnown RBP11.93□□□□□ -0.5
VPS18-203ENST00000558855 TMED7Q9Y3B3 224 aa11.93□□□□□ -0.5
VPS18-203ENST00000558855 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 DSPPQ9NZW4 1301 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 JMJD1CQ15652 2540 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 E7EQL1 145 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 PDLIM1O00151 329 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ABCD4O14678 606 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms