RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PEX5LQ8IYB4 626 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ZNF100Q8IYN0 542 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ZHX1-C8orf76Q96EF9 292 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ITCHQ96J02 903 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 SMR3AQ99954 134 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 OR10A4Q9H209 315 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 MTHFD2LQ9H903 347 aaPredicted RBP10.57□□□□□ -0.72
HERC1-202ENST00000558324 TPT1P8Q9HAU6 139 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 SLCO1B3Q9NPD5 702 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 DLL4Q9NR61 685 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 RLIMQ9NVW2 624 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 P2RX2Q9UBL9 471 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 TMED7Q9Y3B3 224 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ABCA4P78363 2273 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ITPR3Q14573 2671 aa10.57□□□□□ -0.72
HERC1-202ENST00000558324 ZNF469Q96JG9 3925 aaPredicted RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 CFAP73A6NFT4 308 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 POLR3GO15318 223 aaPredicted RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 ARHGEF9O43307 516 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 PMS2P2O95744 297 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 GKN3PP0CG01 181 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 RPS4Y1P22090 263 aaKnown RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 TACR3P29371 465 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 POLR2HP52434 150 aaKnown RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 MVDP53602 400 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 STX1BP61266 288 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 ITGADQ13349 1161 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 P2RY6Q15077 328 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 MAPK11Q15759 364 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 SHEQ5VZ18 495 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 SLC2A7Q6PXP3 512 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 Q6ZT83 130 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 Q71RC1 249 aaPredicted RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 GALNT5Q7Z7M9 940 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 MTDHQ86UE4 582 aaKnown RBP10.56□□□□□ -0.72
HERC1-202ENST00000558324 CCDC103Q8IW40 242 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 CMIPQ8IY22 773 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 CADM2Q8N3J6 435 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 OR52P1PQ8NH57 321 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 LRRC8CQ8TDW0 803 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 POTEKPQ9BYX7 375 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 TCF7L2Q9NQB0 619 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 EMC3Q9P0I2 261 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 OSGIN1Q9UJX0 560 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 HDGFL3Q9Y3E1 203 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 HEATR5AQ86XA9 2040 aa10.56□□□□□ -0.72
HERC1-202ENST00000558324 ZC3H12DA2A288 527 aaKnown RBP10.55□□□□□ -0.72
HERC1-202ENST00000558324 FAM234BA2RU67 622 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 ZNF724A8MTY0 619 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 NR5A2O00482 541 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 RAMP1O60894 148 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 UQCRBP14927 111 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 ADSLP30566 484 aaPredicted RBP10.55□□□□□ -0.72
HERC1-202ENST00000558324 HTR3AP46098 478 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 CRISP3P54108 245 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 EPS8Q12929 822 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 LIN52Q52LA3 116 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 TTMPQ5BVD1 217 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 AP1ARQ63HQ0 302 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 EPGNQ6UW88 154 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 MSANTD1Q6ZTZ1 278 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 YTHDF3Q7Z739 585 aaKnown RBP10.55□□□□□ -0.72
HERC1-202ENST00000558324 PIGXQ8TBF5 258 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 SLC38A5Q8WUX1 472 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 DYDC1Q8WWB3 177 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 AKAP1Q92667 903 aaKnown RBP eCLIP10.55□□□□□ -0.72
HERC1-202ENST00000558324 DDIT4LQ96D03 193 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 TMEM19Q96HH6 336 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 Q96MF0 132 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 PIP5K1AQ99755 562 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 EBF4Q9BQW3 602 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 TMEM204Q9BSN7 226 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 CALML5Q9NZT1 146 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 TMEM181Q9P2C4 612 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 ZNF443Q9Y2A4 671 aaPredicted RBP10.55□□□□□ -0.72
HERC1-202ENST00000558324 NOSIPQ9Y314 301 aaKnown RBP10.55□□□□□ -0.72
HERC1-202ENST00000558324 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 DSPPQ9NZW4 1301 aa10.55□□□□□ -0.72
HERC1-202ENST00000558324 IGKV3D-15A0A087WSY6 115 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 TMEM247A6NEH6 219 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 HS3ST1O14792 307 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 RAD51DO75771 328 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 CD3EP07766 207 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 NUDT7P0C024 238 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 TFPTP0C1Z6 253 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 ZCCHC18P0CG32 403 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 IMPDH2P12268 514 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 PRG2P13727 222 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 FOSL1P15407 271 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 IGHV1-2P23083 117 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 SLC1A3P43003 542 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 PTH2RP49190 550 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms