RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 TLX1P31314 330 aaPredicted RBP15.05■□□□□ -0
SHMT2-232ENST00000557487 RBM34P42696 430 aaKnown RBP15.05■□□□□ -0
SHMT2-232ENST00000557487 GDI2P50395 445 aaKnown RBP15.05■□□□□ -0
SHMT2-232ENST00000557487 RPE65Q16518 533 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 UNQ9370/PRO34162Q6UXP9 181 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 WDR88Q6ZMY6 472 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 NUDT18Q6ZVK8 323 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 USP53Q70EK8 1073 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 SPRED2Q7Z698 418 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 OR5J2Q8NH18 312 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 ZNF671Q8TAW3 534 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 ZFPM2Q8WW38 1151 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 MACROD1Q9BQ69 325 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 C20orf141Q9NUB4 165 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 SERTAD3Q9UJW9 196 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 POMT2Q9UKY4 750 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 MRPS7Q9Y2R9 242 aaKnown RBP15.05■□□□□ -0
SHMT2-232ENST00000557487 HCFC2Q9Y5Z7 792 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 A0A087WV62 115 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 PRR19A6NJB7 356 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 MT-ND4P03905 459 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 WNT1P04628 370 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 IL9P15248 144 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 SIRPAP78324 504 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 CRMP1Q14194 572 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 GPR68Q15743 365 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 TJAP1Q5JTD0 557 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 MRPL2Q5T653 305 aaKnown RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 THSD4Q6ZMP0 1018 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 NLRC3Q7RTR2 1065 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 GPAT4Q86UL3 456 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 OR13C2Q8NGS9 318 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 SERINC2Q96SA4 455 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 C1QTNF7Q9BXJ2 289 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 TMPRSS13Q9BYE2 586 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 ENKD1Q9H0I2 346 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 KIR3DX1Q9H7L2 352 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 NPDC1Q9NQX5 325 aaPredicted RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 A0A1W2PPL8 197 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 EPOPA6NHQ4 379 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 STATHP02808 62 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 MRPL3P09001 348 aaKnown RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 POU2F2P09086 479 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 GIPP09681 153 aaPredicted RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 MAT2AP31153 395 aaKnown RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 BLVRAP53004 296 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 ZP1P60852 638 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 LGALS3BPQ08380 585 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 DCST2Q5T1A1 773 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 FTMTQ8N4E7 242 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 CDRT4Q8N9R6 151 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 OR6C4Q8NGE1 309 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 OR2T4Q8NH00 348 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 CLIP3Q96DZ5 547 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 CNN2Q99439 309 aaKnown RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 UTP23Q9BRU9 249 aaKnown RBP15.04■□□□□ -0
SHMT2-232ENST00000557487 PPA2Q9H2U2 334 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 KLHL9Q9P2J3 617 aa15.04■□□□□ -0
SHMT2-232ENST00000557487 MDC1Q14676 2089 aaKnown RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 A0A1W2PRG6 482 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 IL5P05113 134 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 ANKRD34CP0C6C1 535 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 CEBPBP17676 345 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 ZNF10P21506 573 aaPredicted RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 MNDAP41218 407 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 RAP2BP61225 183 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 OLFML2AQ68BL7 652 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 TMEM65Q6PI78 240 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 KIAA1324Q6UXG2 1013 aaKnown RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 PAQR7Q86WK9 346 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 FAM20CQ8IXL6 584 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 RBPMSQ93062 196 aaKnown RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 METTL17Q9H7H0 456 aaPredicted RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 CERS4Q9HA82 394 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 GPN1Q9HCN4 374 aaPredicted RBP15.03■□□□□ -0
SHMT2-232ENST00000557487 HRASLSQ9HDD0 168 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 ZNF224Q9NZL3 707 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 OR6C2Q9NZP2 312 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 COLEC10Q9Y6Z7 277 aa15.03■□□□□ -0
SHMT2-232ENST00000557487 URADA6NGE7 173 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 SNRPGP15A8MWD9 76 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 KRT33AO76009 404 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 GUSBP08236 651 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 RAB40ALP0C0E4 278 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 CPMP14384 443 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
SHMT2-232ENST00000557487 NOS3P29474 1203 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 MECP2P51608 486 aaKnown RBP15.02■□□□□ -0
SHMT2-232ENST00000557487 RPTNQ6XPR3 784 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 OR11G2Q8NGC1 345 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 CEP76Q8TAP6 659 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 LGALS14Q8TCE9 139 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 RAB40AQ8WXH6 277 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 PELI1Q96FA3 418 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 MSANTD3Q96H12 275 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 CCDC120Q96HB5 630 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 LRRC3BQ96PB8 259 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 MYADMQ96S97 322 aa15.02■□□□□ -0
SHMT2-232ENST00000557487 GAS2L1Q99501 681 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms