RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-209ENST00000557092 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
NEDD1-209ENST00000557092 OR10A4Q9H209 315 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 RAD21L1Q9H4I0 556 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 VIPAS39Q9H9C1 493 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
NEDD1-209ENST00000557092 TMED7Q9Y3B3 224 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 HDGFL3Q9Y3E1 203 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 PCDHB14Q9Y5E9 798 aa16.36■□□□□ 0.21
NEDD1-209ENST00000557092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 GCM2O75603 506 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 PMS2P2O95744 297 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 CD53P19397 219 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 FKBP2P26885 142 aaKnown RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 TACR3P29371 465 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 OR2B6P58173 313 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 EPS8Q12929 822 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 TSC22D1Q15714 1073 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 GALNT5Q7Z7M9 940 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 TGIF2LYQ8IUE0 185 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 ZNF440Q8IYI8 595 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 GABRG1Q8N1C3 465 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 S100PBPQ96BU1 408 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 DDIT4LQ96D03 193 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 SPDL1Q96EA4 605 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 HDHD5Q9BXW7 423 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 RLIMQ9NVW2 624 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 EMC3Q9P0I2 261 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 OSGIN1Q9UJX0 560 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 ING1Q9UK53 422 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 ZNF443Q9Y2A4 671 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-209ENST00000557092 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
NEDD1-209ENST00000557092 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 MED13LQ71F56 2210 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 A0A096LPI6 279 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 TMEM72A0PK05 275 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 ZNF724A8MTY0 619 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 CLIC1O00299 241 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 FAAHO00519 579 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 ADAP00813 363 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 GKN3PP0CG01 181 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 H2AFXP16104 143 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 SLC1A3P43003 542 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 OR3A2P47893 321 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 LARS2Q15031 903 aaKnown RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 RGNQ15493 299 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 SFRP5Q5T4F7 317 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 ABLIM2Q6H8Q1 611 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 MTDHQ86UE4 582 aaKnown RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 FUNDC1Q8IVP5 155 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 ZNF100Q8IYN0 542 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 KISS1RQ969F8 398 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 BEX4Q9NWD9 120 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-209ENST00000557092 PRSS50Q9UI38 385 aa16.34■□□□□ 0.21
NEDD1-209ENST00000557092 A0A0G2JPF8 293 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 CDHR4A6H8M9 788 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 HNRNPCL2B2RXH8 293 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 HNRNPCL3B7ZW38 293 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 C5orf58C9J3I9 102 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 KLF4O43474 513 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 HNRNPCL1O60812 293 aaKnown RBP16.33■□□□□ 0.2
NEDD1-209ENST00000557092 NUDT7P0C024 238 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 HNRNPCL4P0DMR1 293 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 CD99P14209 185 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.2
NEDD1-209ENST00000557092 FADDQ13158 208 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 SQLEQ14534 574 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 P2RY6Q15077 328 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 ACKR1Q16570 336 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 AGKQ53H12 422 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 BLOC1S3Q6QNY0 202 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 LSRQ86X29 649 aaPredicted RBP16.33■□□□□ 0.2
NEDD1-209ENST00000557092 CADM2Q8N3J6 435 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 PIGXQ8TBF5 258 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 THOC1Q96FV9 657 aaKnown RBP16.33■□□□□ 0.2
NEDD1-209ENST00000557092 PLPPR2Q96GM1 343 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 ARMC7Q9H6L4 198 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 TMEM181Q9P2C4 612 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF232Q9UNY5 417 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 ITPR3Q14573 2671 aa16.33■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF814B7Z6K7 855 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF208O43345 1280 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 DNPH1O43598 174 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 THBS1P07996 1170 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 NCF2P19878 526 aaPredicted RBP16.32■□□□□ 0.2
NEDD1-209ENST00000557092 FPR1P21462 350 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 CXCR1P25024 350 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 NR1H2P55055 460 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 COPZ1P61923 177 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 ITGADQ13349 1161 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 ZSWIM7Q19AV6 140 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 Q6ZT83 130 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 BHLHA15Q7RTS1 189 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms