RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 DNAJA2O60884 412 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SERPINB7O75635 380 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 TNFSF13O75888 250 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 AQP8O94778 261 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 PGM3O95394 542 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 NTN1O95631 604 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 ETS2P15036 469 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 HOXB9P17482 250 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-207ENST00000556831 ENPP1P22413 925 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 CXCR1P25024 350 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SLC1A3P43003 542 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 KRTAP10-9P60411 292 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 RAC3P60763 192 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 EPS8Q12929 822 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 TRMT5Q32P41 509 aaKnown RBP12.62□□□□□ -0.39
SLIRP-207ENST00000556831 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SLC30A8Q8IWU4 369 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 MSRB3Q8IXL7 192 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SLC43A2Q8N370 569 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 C11orf65Q8NCR3 313 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 HIPK4Q8NE63 616 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 BHLHE22Q8NFJ8 381 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-207ENST00000556831 OR6K3Q8NGY3 331 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 CPPED1Q9BRF8 314 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-207ENST00000556831 TACO1Q9BSH4 297 aaKnown RBP12.62□□□□□ -0.39
SLIRP-207ENST00000556831 TMEM38AQ9H6F2 299 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SLC52A3Q9NQ40 469 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 CTPS2Q9NRF8 586 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 GALNT8Q9NY28 637 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 KLHL9Q9P2J3 617 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 TRBV5-3A0A0A0MS03 114 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 FAAHO00519 579 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 AP3D1O14617 1153 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 MRASO14807 208 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 SLC22A2O15244 555 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 SS18L1O75177 396 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-207ENST00000556831 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-207ENST00000556831 PRKD3O94806 890 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CD8BP10966 210 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CD1EP15812 388 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 GPX2P18283 190 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CCNA2P20248 432 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 SHC1P29353 583 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-207ENST00000556831 PRKAR1BP31321 381 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
SLIRP-207ENST00000556831 MAP2K6P52564 334 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 DLX5P56178 289 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 MTPNP58546 118 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 RBBP4Q09028 425 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 KLF10Q13118 480 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
SLIRP-207ENST00000556831 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 DLEU7Q6UYE1 221 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 ZZZ3Q8IYH5 903 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 ROBO4Q8WZ75 1007 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 CCDC106Q9BWC9 280 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 SAR1AQ9NR31 198 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 GID8Q9NWU2 228 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 SELENONQ9NZV5 590 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 JKAMPQ9P055 326 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 HDGFL3Q9Y3E1 203 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 GMEB1Q9Y692 573 aa12.61□□□□□ -0.39
SLIRP-207ENST00000556831 TMED7-TICAM2A0A0A6YYA0 188 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 GMNCA6NCL1 334 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 A8MXE2 369 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 CASKO14936 926 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 NPPAP01160 153 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 GKN3PP0CG01 181 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 POU2F1P14859 743 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 TACR3P29371 465 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 AQP1P29972 269 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-207ENST00000556831 DIO1P49895 249 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 MAPK11Q15759 364 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 EXOC3L2Q2M3D2 409 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
SLIRP-207ENST00000556831 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 SPATA21Q7Z572 469 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 BTLAQ7Z6A9 289 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 SNX32Q86XE0 403 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 MED12LQ86YW9 2145 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 ARMC8Q8IUR7 673 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 SLC35B4Q969S0 331 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms