RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SLC7A1P30825 629 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 MSX2P35548 267 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-225ENST00000556798 HTR3AP46098 478 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 PON3Q15166 354 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 CDSNQ15517 529 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 NPTX1Q15818 432 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SYT14P1Q58G82 188 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SAMD4BQ5PRF9 694 aaKnown RBP15.7■□□□□ 0.1
SHMT2-225ENST00000556798 P4HA3Q7Z4N8 544 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 NAXEQ8NCW5 288 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 OR6T1Q8NGN1 323 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 FNDC9Q8TBE3 224 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 RASSF5Q8WWW0 418 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 FAM162AQ96A26 154 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 C3orf49Q96BT1 292 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SDCCAG3Q96C92 435 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TPD52L3Q96J77 140 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 OR5B2Q96R09 309 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SRXN1Q9BYN0 137 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 ADAM19Q9H013 955 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 CALHM2Q9HA72 323 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 Q9UFV3 132 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TESQ9UGI8 421 aaKnown RBP15.7■□□□□ 0.1
SHMT2-225ENST00000556798 RNF6Q9Y252 685 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SPTAN1Q13813 2472 aaKnown RBP15.7■□□□□ 0.1
SHMT2-225ENST00000556798 UTP20O75691 2785 aaKnown RBP15.7■□□□□ 0.1
SHMT2-225ENST00000556798 ICE1Q9Y2F5 2266 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 A0A1B0GWA3 101 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 MBD3L4A6NDZ8 208 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 MBD3L3A6NE82 208 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 MBD3L5A6NJ08 208 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 C8BP07358 591 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 SMSP52788 366 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 BNIP2Q12982 314 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 CEACAM7Q14002 265 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 RIPPLY2Q5TAB7 128 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 RANBP3LQ86VV4 465 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 MBD3L2Q8NHZ7 208 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 SLC25A43Q8WUT9 341 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 PROX1Q92786 737 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 OSTF1Q92882 214 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 ARL5BQ96KC2 179 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 MCHR1Q99705 422 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF559Q9BR84 538 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 RPS6KB2Q9UBS0 482 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 CD300AQ9UGN4 299 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 BAG5Q9UL15 447 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 SH3GLB1Q9Y371 365 aa15.69■□□□□ 0.1
SHMT2-225ENST00000556798 SPIN1Q9Y657 262 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-225ENST00000556798 ZC3H12DA2A288 527 aaKnown RBP15.68■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF682O95780 498 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 SERPINA1P01009 418 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 HSD17B1P14061 328 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 CXCR1P25024 350 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 HTR1EP28566 365 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 TIMP3P35625 211 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 OR1E2P47887 323 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 OR1Q1Q15612 314 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 PDSS1Q5T2R2 415 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 VTCN1Q7Z7D3 282 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 ATG4DQ86TL0 474 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-225ENST00000556798 CARM1Q86X55 608 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 GCNT2Q8N0V5 402 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF808Q8N4W9 903 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-225ENST00000556798 WNT2BQ93097 391 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 UCN2Q96RP3 112 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 TRIM2Q9C040 744 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 COQ3Q9NZJ6 369 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 HCFC1P51610 2035 aa15.68■□□□□ 0.1
SHMT2-225ENST00000556798 A1L4Q6 167 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 CPSF4LA6NMK7 179 aaKnown RBP15.67■□□□□ 0.1
SHMT2-225ENST00000556798 AQP8O94778 261 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 IL2RAP01589 272 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 KLK2P20151 261 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 CEACAM8P31997 349 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-225ENST00000556798 CARD18P57730 90 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 SELENOWP63302 87 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 MYBPHQ13203 477 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 ALG10BQ5I7T1 473 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 GLYATQ6IB77 296 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 TSPYL5Q86VY4 417 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-225ENST00000556798 LSMEM1Q8N8F7 131 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 RNF217Q8TC41 542 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 ROBO4Q8WZ75 1007 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 INTS12Q96CB8 462 aaKnown RBP15.67■□□□□ 0.1
SHMT2-225ENST00000556798 TM9SF2Q99805 663 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 PRRG4Q9BZD6 226 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 PCDHAC1Q9H158 963 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 EVA1AQ9H8M9 152 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 TMEM27Q9HBJ8 222 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 ADPRHL2Q9NX46 363 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 TAS2R1Q9NYW7 299 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 MCTS1Q9ULC4 181 aaKnown RBP15.67■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF175Q9Y473 711 aa15.67■□□□□ 0.1
SHMT2-225ENST00000556798 USP9YO00507 2555 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 PTPN13Q12923 2485 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 IGHV3-15A0A0B4J1V0 119 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 A0A0B4J2E0 115 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 A0A1B0GX12 115 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms