RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 KISS1RQ969F8 398 aaPredicted RBP9.6□□□□□ -0.87
XRCC3-216ENST00000556682 VPS33AQ96AX1 596 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 CCDC28BQ9BUN5 200 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 VIPAS39Q9H9C1 493 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 INTS9Q9NV88 658 aaKnown RBP9.6□□□□□ -0.87
XRCC3-216ENST00000556682 TMEM45AQ9NWC5 275 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 TRAPPC4Q9Y296 219 aa9.6□□□□□ -0.87
XRCC3-216ENST00000556682 TMED7-TICAM2A0A0A6YYA0 188 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 A0A0G2JPF8 293 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 A0A1W2PPR1 153 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 HNRNPCL2B2RXH8 293 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 HNRNPCL3B7ZW38 293 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 C5orf58C9J3I9 102 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 CLIC1O00299 241 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 GPR171O14626 319 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SMAD9O15198 467 aaKnown RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SIAH2O43255 324 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 ZNF208O43345 1280 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 HNRNPCL1O60812 293 aaKnown RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SMPD2O60906 423 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 BCAS1O75363 584 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 GCM2O75603 506 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 ADAP00813 363 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 BCHEP06276 602 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 THBDP07204 575 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 FESP07332 822 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 NUDT7P0C024 238 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 HNRNPCL4P0DMR1 293 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 ETFAP13804 333 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 KLK2P20151 261 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 CCNA2P20248 432 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 CXCR1P25024 350 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 TACR3P29371 465 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 OR3A2P47893 321 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 MRPL19P49406 292 aaKnown RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 IDH3AP50213 366 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 OR2B6P58173 313 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 ADAM8P78325 824 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SLC35A1P78382 337 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 EPS8Q12929 822 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 MRPL2Q5T653 305 aaKnown RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SHEQ5VZ18 495 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 Q6ZT83 130 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 C22orf34Q6ZV56 151 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 P3H2Q8IVL5 708 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 GABRG1Q8N1C3 465 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 SLC38A5Q8WUX1 472 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 S100PBPQ96BU1 408 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 NAA11Q9BSU3 229 aaPredicted RBP9.59□□□□□ -0.87
XRCC3-216ENST00000556682 RABEP2Q9H5N1 569 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 IFT52Q9Y366 437 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 TMED7Q9Y3B3 224 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 PCDHB14Q9Y5E9 798 aa9.59□□□□□ -0.87
XRCC3-216ENST00000556682 F8P00451 2351 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 IGKV3D-15A0A087WSY6 115 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 A0A096LPI6 279 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 CDHR4A6H8M9 788 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 KLF4O43474 513 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 C1QCP02747 245 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 THBS1P07996 1170 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 TFPTP0C1Z6 253 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 FOSL1P15407 271 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 NCF2P19878 526 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 PPIBP23284 216 aaKnown RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 MVDP53602 400 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 AQP5P55064 265 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 NKX6-1P78426 367 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 RGNQ15493 299 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 TTMPQ5BVD1 217 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 PRAMEF8Q5VWM4 474 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 PRAMEF7Q5VXH5 474 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 WBP2NLQ6ICG8 309 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 BHLHA15Q7RTS1 189 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 UBE2J2Q8N2K1 259 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 GTF2H4Q92759 462 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 APH1AQ96BI3 265 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 MUCL1Q96DR8 90 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 AURKBQ96GD4 344 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 ARL5BQ96KC2 179 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 CCL19Q99731 98 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 ESRP2Q9H6T0 727 aaKnown RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 SLCO1B3Q9NPD5 702 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 SLC6A13Q9NSD5 602 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 PARPBPQ9NWS1 579 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 CCDC167Q9P0B6 97 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 OSGIN1Q9UJX0 560 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 ING1Q9UK53 422 aaPredicted RBP9.58□□□□□ -0.88
XRCC3-216ENST00000556682 CORO2BQ9UQ03 480 aa9.58□□□□□ -0.88
XRCC3-216ENST00000556682 NOSIPQ9Y314 301 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms