RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ALPPL2P10696 532 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACP5P13686 325 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 COL9A1P20849 921 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 PAICSP22234 425 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 TEAD1P28347 426 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 HSD11B1P28845 292 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 IGFALSP35858 605 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 FEN1P39748 380 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ITGA1P56199 1179 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTBP60709 375 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTA2P62736 377 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTG1P63261 375 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTG2P63267 376 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTC1P68032 377 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ACTA1P68133 377 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 DMWDQ09019 674 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 MEP1AQ16819 746 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 INAVAQ3KP66 663 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ITPRIPL2Q3MIP1 535 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 SSX6Q7RTT6 188 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 UBE3DQ7Z6J8 389 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 AMER3Q8N944 861 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 CAMKVQ8NCB2 501 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 SEMA6DQ8NFY4 1073 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OR5AK3PQ8NH89 298 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 RLN3Q8WXF3 142 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ISOC1Q96CN7 298 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 MRPL38Q96DV4 380 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 DOK1Q99704 481 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 SLC35A5Q9BS91 424 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 C1QTNF2Q9BXJ5 285 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 NAA50Q9GZZ1 169 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ESRP2Q9H6T0 727 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 EXO5Q9H790 373 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 POLE4Q9NR33 117 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 BABAM2Q9NXR7 383 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 SLC17A4Q9Y2C5 497 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 NUBP2Q9Y5Y2 271 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 A0A0X1KG70 313 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 MEIOCA2RUB1 952 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 C4orf51C9J302 202 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 B4GALT2O60909 372 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ADH1BP00325 375 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 CRYABP02511 175 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OPN1SWP03999 348 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 IL7P13232 177 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 CBR1P16152 277 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 HOXB6P17509 224 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 TNFRSF1BP20333 461 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ADH6P28332 368 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 AVPR2P30518 371 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 XKP51811 444 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ADPRHP54922 357 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 C2orf80Q0P641 193 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 PLA2G7Q13093 441 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 RIN1Q13671 783 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 POU4F3Q15319 338 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 PLEKHN1Q494U1 663 aaPredicted RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ZBTB37Q5TC79 503 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 XKRXQ6PP77 449 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 KCTD8Q6ZWB6 473 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 NOXA1Q86UR1 476 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 C8orf59Q8N0T1 100 aaPredicted RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 STX19Q8N4C7 294 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OR52N2Q8NGI0 321 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OR2A1Q8NGT9 310 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OR5J2Q8NH18 312 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 UCN3Q969E3 161 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 POP5Q969H6 163 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF479Q96JC4 524 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 PRAP1Q96NZ9 151 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 F2RL3Q96RI0 385 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 GABRG3Q99928 467 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 MYOCQ99972 504 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 YTHDF1Q9BYJ9 559 aaKnown RBP4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ANKRD19PQ9H560 264 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 AHSPQ9NZD4 102 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 OPN4Q9UHM6 478 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 ICKQ9UPZ9 632 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 KCNK6Q9Y257 313 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 PADI2Q9Y2J8 665 aa4.73□□□□□ -1.65
TMEM260-210ENST00000556422 FRYLO94915 3013 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CIB4A0PJX0 185 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 OR52A4PA6NMU1 304 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CTDSP2O14595 271 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TMPRSS11DO60235 418 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ITGAMP11215 1152 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CPT2P23786 658 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FRKP42685 505 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 DGKEP52429 567 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 MAP2K6P52564 334 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PCBP3P57721 371 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PPP2CBP62714 309 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SELENOWP63302 87 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PPP2CAP67775 309 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ACSM1Q08AH1 577 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 EPS8Q12929 822 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FLYWCH1Q4VC44 716 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 C6orf141Q5SZD1 244 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms