RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 VMP1Q96GC9 406 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 LOXL4Q96JB6 756 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 LRFN5Q96NI6 719 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 MGLLQ99685 303 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 MND1Q9BWT6 205 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 TAPBPLQ9BX59 468 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 SEMA4CQ9C0C4 833 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 OR8D2Q9GZM6 311 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 LAT2Q9GZY6 243 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 NXF5Q9H1B4 397 aaKnown RBP7.6□□□□□ -1.19
ATXN3-235ENST00000556082 SLC26A1Q9H2B4 701 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 OR52D1Q9H346 318 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 DSN1Q9H410 356 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 SIAEQ9HAT2 523 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 MEPEQ9NQ76 525 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-235ENST00000556082 TBC1D23Q9NUY8 699 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 COPS7AQ9UBW8 275 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 SIGLEC7Q9Y286 467 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 EXOGQ9Y2C4 368 aaKnown RBP7.6□□□□□ -1.19
ATXN3-235ENST00000556082 LSM2Q9Y333 95 aaKnown RBP7.6□□□□□ -1.19
ATXN3-235ENST00000556082 A3GALT2U3KPV4 340 aa7.6□□□□□ -1.19
ATXN3-235ENST00000556082 ARID1BQ8NFD5 2236 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-235ENST00000556082 PCDH15Q96QU1 1955 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TMEM129A0AVI4 362 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TMEM221A6NGB7 291 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ALG1L2C9J202 215 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 M0R296 226 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SCDO00767 359 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF264O43296 627 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 AIREO43918 545 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 PIP5K1CO60331 668 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 EIF4E2O60573 245 aaKnown RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TSPAN2O60636 221 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 RAB36O95755 333 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SCG5P05408 212 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 GP1BAP07359 652 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ADRA2AP08913 450 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ZGLP1P0C6A0 271 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 UBL4AP11441 157 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 NAGAP17050 411 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SLC6A8P48029 635 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 MTNR1AP48039 350 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 RFX3P48380 749 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SLC9A3P48764 834 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 FXYD6P3P58550 94 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 OCA2Q04671 838 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ZFP36L1Q07352 338 aaKnown RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SKP2Q13309 424 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 DCTN2Q13561 401 aaKnown RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SPHARQ15513 63 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 DGUOKQ16854 277 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ISXQ2M1V0 245 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF829Q3KNS6 432 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ANKDD1AQ495B1 522 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 C1orf189Q5VU69 101 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 HLA-DQA1Q5Y7H0 255 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SLC30A6Q6NXT4 461 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SMARCD3Q6STE5 483 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 KIRREL2Q6UWL6 708 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SLC29A4Q7RTT9 530 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 GID4Q8IVV7 300 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 C9orf40Q8IXQ3 194 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SLC34A3Q8N130 599 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 ZNF321PQ8N8H1 164 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TMEM105Q8N8V8 129 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 NFAM1Q8NET5 270 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 OR52L1Q8NGH7 329 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 OR8K3Q8NH51 312 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 PFN4Q8NHR9 129 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 IFI44Q8TCB0 444 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 STT3BQ8TCJ2 826 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 DYNC2LI1Q8TCX1 351 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 RNFT2Q96EX2 444 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 PLEKHA8Q96JA3 519 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 SAMD8Q96LT4 415 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 CCDC74BQ96LY2 380 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 OR6C1Q96RD1 312 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 DCUN1D5Q9BTE7 237 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TMEM43Q9BTV4 400 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 WWTR1Q9GZV5 400 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 PLGRKTQ9HBL7 147 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 C20orf141Q9NUB4 165 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 RPS6KB2Q9UBS0 482 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 OSGIN1Q9UJX0 560 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 EXOSC1Q9Y3B2 195 aaKnown RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 PCDHGA3Q9Y5H0 932 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 NINQ8N4C6 2090 aa7.59□□□□□ -1.19
ATXN3-235ENST00000556082 TNRC6BQ9UPQ9 1833 aaKnown RBP7.59□□□□□ -1.19
ATXN3-235ENST00000556082 CABIN1Q9Y6J0 2220 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 FAM86C2PA6NEL3 165 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 OR6C70A6NIJ9 312 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 A8MUA0 341 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 J3QRE1 110 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 CCRL2O00421 344 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 TMPRSS2O15393 492 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 IDH3BO43837 385 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 RFPL3O75679 317 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 SCRG1O75711 98 aa7.58□□□□□ -1.2
ATXN3-235ENST00000556082 PEPDP12955 493 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms