RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 OR10A4Q9H209 315 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 RAD21L1Q9H4I0 556 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 VIPAS39Q9H9C1 493 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 TMED7Q9Y3B3 224 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 HDGFL3Q9Y3E1 203 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 PCDHB14Q9Y5E9 798 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 GCM2O75603 506 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 PMS2P2O95744 297 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 CD53P19397 219 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 FKBP2P26885 142 aaKnown RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 TACR3P29371 465 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 OR2B6P58173 313 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 EPS8Q12929 822 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 TSC22D1Q15714 1073 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 GALNT5Q7Z7M9 940 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 TGIF2LYQ8IUE0 185 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF440Q8IYI8 595 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 GABRG1Q8N1C3 465 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 S100PBPQ96BU1 408 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 DDIT4LQ96D03 193 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 SPDL1Q96EA4 605 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 HDHD5Q9BXW7 423 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 RLIMQ9NVW2 624 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 EMC3Q9P0I2 261 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 OSGIN1Q9UJX0 560 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 ING1Q9UK53 422 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF443Q9Y2A4 671 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-208ENST00000555806 DSPPQ9NZW4 1301 aa16.35■□□□□ 0.21
NEDD1-208ENST00000555806 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 MED13LQ71F56 2210 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 A0A096LPI6 279 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 TMEM72A0PK05 275 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF724A8MTY0 619 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 CLIC1O00299 241 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 FAAHO00519 579 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 ADAP00813 363 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 GKN3PP0CG01 181 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 H2AFXP16104 143 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 SLC1A3P43003 542 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 OR3A2P47893 321 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 LARS2Q15031 903 aaKnown RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 RGNQ15493 299 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 SFRP5Q5T4F7 317 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 ABLIM2Q6H8Q1 611 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 MTDHQ86UE4 582 aaKnown RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 FUNDC1Q8IVP5 155 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF100Q8IYN0 542 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 KISS1RQ969F8 398 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 BEX4Q9NWD9 120 aaPredicted RBP16.34■□□□□ 0.21
NEDD1-208ENST00000555806 PRSS50Q9UI38 385 aa16.34■□□□□ 0.21
NEDD1-208ENST00000555806 A0A0G2JPF8 293 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 CDHR4A6H8M9 788 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 HNRNPCL2B2RXH8 293 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 HNRNPCL3B7ZW38 293 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 C5orf58C9J3I9 102 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 KLF4O43474 513 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 HNRNPCL1O60812 293 aaKnown RBP16.33■□□□□ 0.2
NEDD1-208ENST00000555806 NUDT7P0C024 238 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 HNRNPCL4P0DMR1 293 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 CD99P14209 185 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.2
NEDD1-208ENST00000555806 FADDQ13158 208 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 SQLEQ14534 574 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 P2RY6Q15077 328 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 ACKR1Q16570 336 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 AGKQ53H12 422 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 BLOC1S3Q6QNY0 202 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 LSRQ86X29 649 aaPredicted RBP16.33■□□□□ 0.2
NEDD1-208ENST00000555806 CADM2Q8N3J6 435 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 PIGXQ8TBF5 258 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 THOC1Q96FV9 657 aaKnown RBP16.33■□□□□ 0.2
NEDD1-208ENST00000555806 PLPPR2Q96GM1 343 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 ARMC7Q9H6L4 198 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 TMEM181Q9P2C4 612 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 ZNF232Q9UNY5 417 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 ITPR3Q14573 2671 aa16.33■□□□□ 0.2
NEDD1-208ENST00000555806 ZNF814B7Z6K7 855 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 ZNF208O43345 1280 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 DNPH1O43598 174 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 THBS1P07996 1170 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 NCF2P19878 526 aaPredicted RBP16.32■□□□□ 0.2
NEDD1-208ENST00000555806 FPR1P21462 350 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 CXCR1P25024 350 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 NR1H2P55055 460 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 COPZ1P61923 177 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 ITGADQ13349 1161 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 ZSWIM7Q19AV6 140 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 Q6ZT83 130 aa16.32■□□□□ 0.2
NEDD1-208ENST00000555806 BHLHA15Q7RTS1 189 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms