RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 RNPS1Q15287 305 aaKnown RBP12.24□□□□□ -0.45
SHMT2-219ENST00000555563 CYP51A1Q16850 503 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ZSWIM7Q19AV6 140 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 TRMT5Q32P41 509 aaKnown RBP12.24□□□□□ -0.45
SHMT2-219ENST00000555563 REEP3Q6NUK4 255 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF550Q7Z398 422 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 SERPINA11Q86U17 422 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ADGRG3Q86Y34 549 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 PTOV1Q86YD1 416 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF610Q8N9Z0 462 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 LINC01560Q8TB33 94 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 SLC39A3Q9BRY0 314 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 RSPO3Q9BXY4 272 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF232Q9UNY5 417 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 TMED7Q9Y3B3 224 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 TMEM72A0PK05 275 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 FXYD1O00168 92 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 SULT2B1O00204 365 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 SLC6A2P23975 617 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 PRKAR1BP31321 381 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 CD79BP40259 229 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 REP15Q6BDI9 236 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 GTF2IRD2BQ6EKJ0 949 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 GTF2IRD2Q86UP8 949 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 SNX32Q86XE0 403 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 KRT73Q86Y46 540 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 CADM2Q8N3J6 435 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 HIPK4Q8NE63 616 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 ADAM19Q9H013 955 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 ARMC7Q9H6L4 198 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 C12orf49Q9H741 205 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 ARMCX1Q9P291 453 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 ANGPT4Q9Y264 503 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 HDGFL3Q9Y3E1 203 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 CAPN7Q9Y6W3 813 aa12.23□□□□□ -0.45
SHMT2-219ENST00000555563 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 SH3D21A4FU49 640 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 A6NNC1 897 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 MRASO14807 208 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF208O43345 1280 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 CYTIPO60759 359 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 CTAG2O75638 210 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 PRKD3O94806 890 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 PMS2P2O95744 297 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 POU2F1P14859 743 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 KCNJ5P48544 419 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 PCYT1AP49585 367 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 HOXC5Q00444 222 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 MAPRE2Q15555 327 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 COQ5Q5HYK3 327 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 TMEM201Q5SNT2 666 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 WBP2NLQ6ICG8 309 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 DHRS4L2Q6PKH6 230 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 NUFIP2Q7Z417 695 aaKnown RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 NET1Q7Z628 596 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 SLC43A2Q8N370 569 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF300Q96RE9 604 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 GPATCH1Q9BRR8 931 aaKnown RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 SPATA5L1Q9BVQ7 753 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 KAT8Q9H7Z6 458 aaKnown RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 GP6Q9HCN6 339 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 PLSCR4Q9NRQ2 329 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 ELOVL5Q9NYP7 299 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 KLHL9Q9P2J3 617 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 ING1Q9UK53 422 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-219ENST00000555563 TESMINQ9Y4I5 508 aa12.22□□□□□ -0.45
SHMT2-219ENST00000555563 CSMD1Q96PZ7 3565 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.45
SHMT2-219ENST00000555563 TPST1O60507 370 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 EPXP11678 715 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 IMPDH2P12268 514 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 FKBP2P26885 142 aaKnown RBP12.21□□□□□ -0.45
SHMT2-219ENST00000555563 ADSLP30566 484 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-219ENST00000555563 PCGF2P35227 344 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 UGT2B10P36537 528 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 CLK1P49759 484 aaKnown RBP12.21□□□□□ -0.45
SHMT2-219ENST00000555563 SEC24CP53992 1094 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 PCBP3P57721 371 aaKnown RBP12.21□□□□□ -0.45
SHMT2-219ENST00000555563 COPZ1P61923 177 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 RBBP4Q09028 425 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 RASGEF1BQ0VAM2 473 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 MMEL1Q495T6 779 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 RABL3Q5HYI8 236 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 TFAP2EQ6VUC0 442 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 STK32CQ86UX6 486 aa12.21□□□□□ -0.45
SHMT2-219ENST00000555563 OR10A6Q8NH74 314 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms