RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
SHMT2-214ENST00000554604 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
SHMT2-214ENST00000554604 ENPP4Q9Y6X5 453 aa11.28□□□□□ -0.6
SHMT2-214ENST00000554604 FBN2P35556 2912 aa11.27□□□□□ -0.6
SHMT2-214ENST00000554604 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 E9PQ18 207 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 EMC8O43402 210 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 TSPAN2O60636 221 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 TOXO94900 526 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 MFN2O95140 757 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 MATN1P21941 496 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 SSTR2P30874 369 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 PTGDSP41222 190 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 HMGA2P52926 109 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-214ENST00000554604 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 RPS26P62854 115 aaKnown RBP11.27□□□□□ -0.61
SHMT2-214ENST00000554604 PRR5P85299 388 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 GNA13Q14344 377 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 DECR1Q16698 335 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 PRAMEF8Q5VWM4 474 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 PRAMEF7Q5VXH5 474 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 VASNQ6EMK4 673 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 SZRD1Q7Z422 152 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 YRDCQ86U90 279 aaKnown RBP11.27□□□□□ -0.61
SHMT2-214ENST00000554604 PLCZ1Q86YW0 608 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 OR2L13Q8N349 312 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 OR4N2Q8NGD1 307 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 BBS10Q8TAM1 723 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF607Q96SK3 696 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 ENKD1Q9H0I2 346 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 C3orf14Q9HBI5 128 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 BCL2L10Q9HD36 194 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 Q9N2J8 555 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 Q9UFV3 132 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 MRTO4Q9UKD2 239 aaKnown RBP11.27□□□□□ -0.61
SHMT2-214ENST00000554604 WIF1Q9Y5W5 379 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
SHMT2-214ENST00000554604 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 SERPINB7O75635 380 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ACTL6AO96019 429 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 IFNW1P05000 195 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 IFI6P09912 130 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ANXA8P13928 327 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 BMP7P18075 431 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 RHCEP18577 417 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ADH7P40394 386 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 LIMS1P48059 325 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 RFX3P48380 749 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 KCNJ5P48544 419 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PSMD4P55036 377 aaKnown RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 CDH15P55291 814 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ISL1P61371 349 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PSG6Q00889 435 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 SPIBQ01892 262 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 HSPB2Q16082 182 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ACSF3Q4G176 576 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 C6orf141Q5SZD1 244 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 RIPPLY2Q5TAB7 128 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 WDR53Q7Z5U6 358 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 KRT73Q86Y46 540 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 WDSUB1Q8N9V3 476 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ATG16L2Q8NAA4 619 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 RAB8BQ92930 207 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF566Q969W8 418 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 NTNG2Q96CW9 530 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PITX2Q99697 317 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PIP5K1AQ99755 562 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 BTBD2Q9BX70 525 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 GABARAPL3Q9BY60 117 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PRDM14Q9GZV8 571 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 EQTNQ9NQ60 294 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 KRT84Q9NSB2 600 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 TAS2R10Q9NYW0 307 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 NTMQ9P121 344 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 CBLCQ9ULV8 474 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 FAM32AQ9Y421 112 aaKnown RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 TESMINQ9Y4I5 508 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 GPC6Q9Y625 555 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-214ENST00000554604 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
SHMT2-214ENST00000554604 PRAMEF27A3QJZ7 478 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ENO4A6NNW6 628 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SCO2O43819 266 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 EPPINO95925 133 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 IL2RAP01589 272 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms