RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ITGAMP11215 1152 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 UBL4AP11441 157 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 GP1BBP13224 206 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CNR1P21554 472 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ITPKBP27987 946 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 PEX19P40855 299 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CYB561P49447 251 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 HLCSP50747 726 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 P2RX1P51575 399 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MAP2K6P52564 334 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 SUMO3P55854 103 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 FOXL2P58012 376 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 VLDLRP98155 873 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 COX10Q12887 443 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ATP1A4Q13733 1029 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CBFBQ13951 182 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 OR1Q1Q15612 314 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 NNATQ16517 81 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MICAQ29983 383 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 GRAMD1BQ3KR37 738 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ENTPD8Q5MY95 495 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ACER2Q5QJU3 275 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 OGFRL1Q5TC84 451 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 AGAP7PQ5VUJ5 663 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 WBP2NLQ6ICG8 309 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF613Q6PF04 617 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ULK3Q6PHR2 472 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 TTC33Q6PID6 262 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ISLR2Q6UXK2 745 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 IL20RBQ6UXL0 311 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 RTL4Q6ZR62 310 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 PLEKHM3Q6ZWE6 761 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 GALNT10Q86SR1 603 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MARCH9Q86YJ5 346 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 PRR22Q8IZ63 422 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CLIP4Q8N3C7 705 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 GALNT16Q8N428 558 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 LSMEM1Q8N8F7 131 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF555Q8NEP9 628 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 GPR32P1Q8NGA4 272 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 OR6T1Q8NGN1 323 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 OR10Q1Q8NGQ4 319 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF563Q8TA94 476 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 VANGL1Q8TAA9 524 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 DNAJA4Q8WW22 397 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 DVL3Q92997 716 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 SPACA9Q96E40 222 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MPP4Q96JB8 637 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 RDH12Q96NR8 316 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 AGAP4Q96P64 663 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 RASL10BQ96S79 203 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 UTP23Q9BRU9 249 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 QRSL1Q9H0R6 528 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 METTL7AQ9H8H3 244 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 LIN28AQ9H9Z2 209 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 NMNAT1Q9HAN9 279 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 C12orf10Q9HB07 376 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CPNE5Q9HCH3 593 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 SACM1LQ9NTJ5 587 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 KLRF1Q9NZS2 232 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 PPP4R1LQ9P1A2 415 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 DKK4Q9UBT3 224 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 IL17BQ9UHF5 180 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 RIMS3Q9UJD0 308 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 KLK13Q9UKR3 277 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 ACAD8Q9UKU7 415 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MGAT4BQ9UQ53 548 aa4.57□□□□□ -1.68
VTI1B-202ENST00000553619 SAMHD1Q9Y3Z3 626 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 MRPS18BQ9Y676 258 aaKnown RBP4.57□□□□□ -1.68
VTI1B-202ENST00000553619 CNOT1A5YKK6 2376 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 EYSQ5T1H1 3165 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 DOCK10Q96BY6 2186 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NPIPA5A0A0B4J1W7 369 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 A0A1W2PRQ8 180 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ARRDC5A6NEK1 342 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PRAMEF25A6NGN4 478 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ARGFXA6NJG6 315 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 SAC3D1A6NKF1 404 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CPSF4LA6NMK7 179 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NPIPA7E9PJI5 369 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 KLRC4-KLRK1H3BQV0 150 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 KLK10O43240 276 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HCRTR2O43614 444 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ICOSLGO75144 302 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CBR3O75828 277 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 RASAL1O95294 804 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NUDT14O95848 222 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 HPRP00739 348 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 UBTFL6P0CB48 400 aaPredicted RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 GKN3PP0CG01 181 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 NPIPA8P0DM63 369 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 PNMTP11086 282 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 ACADSP16219 412 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 GSTM3P21266 225 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 EVI2BP34910 448 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 SOX3P41225 446 aa4.56□□□□□ -1.68
VTI1B-202ENST00000553619 APOBEC1P41238 236 aaKnown RBP4.56□□□□□ -1.68
VTI1B-202ENST00000553619 CASP3P42574 277 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms