RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 NEUROG1Q92886 237 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 RAB8BQ92930 207 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 ROPN1LQ96C74 230 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 ZG16BQ96DA0 208 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 KLHL15Q96M94 604 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 OR52E6Q96RD3 313 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 USB1Q9BQ65 265 aaKnown RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 SLC35A5Q9BS91 424 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 INPP5KQ9BT40 448 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 GRIP2Q9C0E4 1043 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 LAT2Q9GZY6 243 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 SHARPINQ9H0F6 387 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 TMEM185BQ9H7F4 350 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 SDR39U1Q9NRG7 319 aaPredicted RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 FAIMQ9NVQ4 179 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 GDF2Q9UK05 429 aaPredicted RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 FAM234BA2RU67 622 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 HMGN4O00479 90 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 TGDSO95455 350 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 NUDT14O95848 222 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 CD8AP01732 235 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 IDO1P14902 403 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ME2P23368 584 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 PGM1P36871 562 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 CARD18P57730 90 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
SRP54-203ENST00000553544 CBFBQ13951 182 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 QPRTQ15274 297 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 NRF1Q16656 503 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 GSTA3Q16772 222 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 TMEM249Q2WGJ8 235 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 PDSS1Q5T2R2 415 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ATAD3BQ5T9A4 648 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 HBMQ6B0K9 141 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 CYB5R2Q6BCY4 276 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 FRRS1Q6ZNA5 592 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.47□□□□□ -0.73
SRP54-203ENST00000553544 ZNF614Q8N883 585 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 OR10H5Q8NGA6 315 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 MAGEB18Q96M61 343 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ADAD1Q96M93 576 aaKnown RBP10.47□□□□□ -0.73
SRP54-203ENST00000553544 OR52B2Q96RD2 323 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 PANX1Q96RD7 426 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ZBTB18Q99592 522 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 SIKE1Q9BRV8 207 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 TRAF4Q9BUZ4 470 aaPredicted RBP10.47□□□□□ -0.73
SRP54-203ENST00000553544 COQ10BQ9H8M1 238 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 CISD1Q9NZ45 108 aaKnown RBP10.47□□□□□ -0.73
SRP54-203ENST00000553544 WDR45Q9Y484 360 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 ANK2Q01484 3957 aa10.47□□□□□ -0.73
SRP54-203ENST00000553544 IGHV4-30-2A0A087WSY4 118 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 SLC22A3O75751 556 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 CSTAP01040 98 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 IL6P05231 212 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 PABPC4LP0CB38 370 aaKnown RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 IL32P24001 234 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 SFTPDP35247 375 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 CHI3L1P36222 383 aaPredicted RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 KHKP50053 298 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 NUDT6P53370 316 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 MVDP53602 400 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 VLDLRP98155 873 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 PLAURQ03405 335 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 CHRNEQ04844 493 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 TAB1Q15750 504 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ZNF239Q16600 458 aaKnown RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 SFRP5Q5T4F7 317 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 NXNQ6DKJ4 435 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 EPGNQ6UW88 154 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ZNF621Q6ZSS3 439 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 EIF3MQ7L2H7 374 aaKnown RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 RNF130Q86XS8 419 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ZNF619Q8N2I2 560 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 TRIML2Q8N7C3 387 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 RFWD2Q8NHY2 731 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 RNF128Q8TEB7 428 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ZFP90Q8TF47 636 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 CPNE4Q96A23 557 aaPredicted RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 THUMPD3Q9BV44 507 aaKnown RBP10.46□□□□□ -0.73
SRP54-203ENST00000553544 SRXN1Q9BYN0 137 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 SLC38A1Q9H2H9 487 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 C12orf49Q9H741 205 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 MRGBPQ9NV56 204 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 ZIM2Q9NZV7 527 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 SLC35A3Q9Y2D2 325 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.73
SRP54-203ENST00000553544 CR1P17927 2039 aa10.46□□□□□ -0.74
SRP54-203ENST00000553544 DPRXA6NFQ7 191 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 GJE1A6NN92 205 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 UBDO15205 165 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 POLR3GO15318 223 aaPredicted RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 BCAS1O75363 584 aaPredicted RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 H6PDO95479 791 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 GSNP06396 782 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms