RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 OR8D4Q8NGM9 314 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 OR4C3Q8NH37 302 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 OR52N1Q8NH53 320 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 TBC1D15Q8TC07 691 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 IFI44Q8TCB0 444 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 STT3BQ8TCJ2 826 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 BORCS5Q969J3 196 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 ZHX1-C8orf76Q96EF9 292 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 SGTBQ96EQ0 304 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 RNFT2Q96EX2 444 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 CCDC74BQ96LY2 380 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 OR6C1Q96RD1 312 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 GFM1Q96RP9 751 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 RHNO1Q9BSD3 238 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 TAPBPLQ9BX59 468 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 PLA2G12AQ9BZM1 189 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 WDR12Q9GZL7 423 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 OR8D2Q9GZM6 311 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 WWTR1Q9GZV5 400 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 NAA50Q9GZZ1 169 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 MMP27Q9H306 513 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 UBQLN3Q9H347 655 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 LIN28AQ9H9Z2 209 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 HMG20AQ9NP66 347 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 HAO2Q9NYQ3 351 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 DNAJC27Q9NZQ0 273 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 FLRT3Q9NZU0 649 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 CCDC59Q9P031 241 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 AKAP7Q9P0M2 348 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 KLHL21Q9UJP4 597 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 SIGLEC7Q9Y286 467 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 B3GNT3Q9Y2A9 372 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 DTX4Q9Y2E6 619 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 LSM2Q9Y333 95 aaKnown RBP6.7□□□□□ -1.34
ATXN3-221ENST00000553498 SLC6A5Q9Y345 797 aa6.7□□□□□ -1.34
ATXN3-221ENST00000553498 NPIPA5A0A0B4J1W7 369 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TMEM221A6NGB7 291 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SAGE2PA6NJ88 616 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 D6RAR5 112 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NPIPA7E9PJI5 369 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TMX2-CTNND1H3BSU7 103 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 M0R296 226 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 GTPBP1O00178 669 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NTN3O00634 580 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CDC42EP2O14613 210 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 IMPA2O14732 288 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ARPC3O15145 178 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 HYAL3O43820 417 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CDC40O60508 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TSPAN2O60636 221 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ALOX12BO75342 701 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 PDGFBP01127 241 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 HEXBP07686 556 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 IGFBP1P08833 259 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NPIPA8P0DM63 369 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 HK1P19367 917 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CD53P19397 219 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 PGCP20142 388 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 MAKP20794 623 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ACP1P24666 158 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SOX6P35712 828 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 LIPAP38571 399 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SLC1A3P43003 542 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 HTR3AP46098 478 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 RFX3P48380 749 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TMED10P49755 219 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 LIMK1P53667 647 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SUMO3P55854 103 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 WNT4P56705 351 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SLC26A5P58743 744 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ACTC1P68032 377 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ACTA1P68133 377 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 LGALS3BPQ08380 585 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 PLCXD2Q0VAA5 305 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 FOXD4Q12950 439 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SKP2Q13309 424 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 GPR50Q13585 617 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TPBGQ13641 420 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SPCS2Q15005 226 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TRIM61Q5EBN2 209 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 VWA2Q5GFL6 755 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SLC30A6Q6NXT4 461 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TUBA3EQ6PEY2 450 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 KIRREL2Q6UWL6 708 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 HSDL2Q6YN16 418 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 WDR88Q6ZMY6 472 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 DPY19L2P2Q6ZN68 376 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 DBX2Q6ZNG2 339 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 COX15Q7KZN9 410 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 MEPCEQ7L2J0 689 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CXXC5Q7LFL8 322 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SLC15A4Q8N697 577 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 EID2Q8N6I1 236 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 OR4Q3Q8NH05 313 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 OR6S1Q8NH40 331 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 DYNC2LI1Q8TCX1 351 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 GRHL3Q8TE85 626 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 TSLPQ969D9 159 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms