RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 CRMP1Q14194 572 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 CCDC58Q4VC31 144 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 TIGD3Q6B0B8 471 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-205ENST00000553474 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 TSTD1Q8NFU3 115 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 OR51A7Q8NH64 312 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 GRHL3Q8TE85 626 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 C17orf50Q8WW18 174 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 CLDN23Q96B33 292 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 KLHDC7BQ96G42 594 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 HCAR1Q9BXC0 346 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 ERVMER34-1Q9H9K5 563 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 MCCC2Q9HCC0 563 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 FAM60AQ9NP50 221 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 PRODH2Q9UF12 536 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 CHRNA9Q9UGM1 479 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 KMT2EQ8IZD2 1858 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 TRAV27A0A087WT01 109 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 A0A087WUJ7 227 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CHURC1-FNTBB4DL54 471 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 LRRTM2O43300 516 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 LYRM1O43325 122 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 HRO43593 1189 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 RFPL3O75679 317 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ARL6IP5O75915 188 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 PPP1R3DO95685 299 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 FUT1P19526 365 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ADH7P40394 386 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 KIR2DL3P43628 341 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SLC16A1P53985 500 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CAV3P56539 151 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 PRPS1P60891 318 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 IL10RAQ13651 578 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TCTE1Q5JU00 501 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TRILQ7L0X0 811 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SYT13Q7L8C5 426 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ZAR1Q86SH2 424 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 GATAD2AQ86YP4 633 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ABHD4Q8TB40 342 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 HAVCR2Q8TDQ0 301 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SLC7A6Q92536 515 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SGTBQ96EQ0 304 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 C4orf36Q96KX1 117 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TCEAL2Q9H3H9 227 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 MED20Q9H944 212 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 PRTFDC1Q9NRG1 225 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 WSB2Q9NYS7 404 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 EPHA6Q9UF33 1036 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 N6AMT1Q9Y5N5 214 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CUL9Q8IWT3 2517 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 A0A1B0GTQ1 180 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 C2orf92A0A1B0GVN3 265 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 H0YIG0 161 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SLC43A1O75387 559 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 GATBO75879 557 aaKnown RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 NPR2P20594 1047 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 S100A1P23297 94 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CAPZBP47756 277 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF85Q03923 595 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CRYZQ08257 329 aaKnown RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 FHL1Q13642 323 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ELOCQ15369 112 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TBRG1Q3YBR2 411 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TMEM53Q6P2H8 277 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ARL9Q6T311 187 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 DGAT2L6Q6ZPD8 337 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 MED25Q71SY5 747 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 NUP54Q7Z3B4 507 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SLITRK4Q8IW52 837 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 OR7G1Q8NGA0 311 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TOE1Q96GM8 510 aaKnown RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 PGLYRP3Q96LB9 341 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 TNFRSF13CQ96RJ3 184 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 CNN2Q99439 309 aaKnown RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 STARD5Q9NSY2 213 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 ZMIZ1Q9ULJ6 1067 aa11.87□□□□□ -0.51
SHMT2-205ENST00000553474 SIRT4Q9Y6E7 314 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-205ENST00000553474 A0A0A6YYC8 382 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 FAM240BA0A1B0GVZ2 78 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 I3L1I5 382 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 OGG1O15527 345 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 FOXS1O43638 330 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 ORC5O43913 435 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF217O75362 1048 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms