RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 LRIF1Q5T3J3 769 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 RNF220Q5VTB9 566 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 STEAP2Q8NFT2 490 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 OR52P1PQ8NH57 321 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 ALPK1Q96QP1 1244 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 PSD2Q9BQI7 771 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 LIME1Q9H400 295 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 C12orf49Q9H741 205 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 BCL2L10Q9HD36 194 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 CCDC167Q9P0B6 97 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 IFT52Q9Y366 437 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 MED13LQ71F56 2210 aa11.71□□□□□ -0.53
HNRNPC-205ENST00000553300 FREM1Q5H8C1 2179 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 CDHR4A6H8M9 788 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 DEFB108AA8MXU0 73 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 BCHEP06276 602 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 COPZ1P61923 177 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 PLAURQ03405 335 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 EPS8Q12929 822 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 SQLEQ14534 574 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 MAPK11Q15759 364 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 SLC2A7Q6PXP3 512 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 TFAP2EQ6VUC0 442 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 ZNF550Q7Z398 422 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 HMGN2P46Q86SG4 172 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 FUNDC1Q8IVP5 155 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 GABRG1Q8N1C3 465 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 SLC35B4Q969S0 331 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 DDIT4LQ96D03 193 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 AURKBQ96GD4 344 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 A4GALTQ9NPC4 353 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 EMC3Q9P0I2 261 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 C6orf203Q9P0P8 240 aaPredicted RBP11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 TMEM181Q9P2C4 612 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 CORO2BQ9UQ03 480 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
HNRNPC-205ENST00000553300 IGKV3D-15A0A087WSY6 115 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 IGHV3-15A0A0B4J1V0 119 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 A0A1W2PP18 115 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 GPR171O14626 319 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 SMAD9O15198 467 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ADAM11O75078 769 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ATE1O95260 518 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 FESP07332 822 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 OR3A2P47893 321 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 NR1H2P55055 460 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 POU4F3Q15319 338 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 GTDC1Q4AE62 458 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 BEX5Q5H9J7 111 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 WBP2NLQ6ICG8 309 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 Q6ZT83 130 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 NUFIP2Q7Z417 695 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 GALNT5Q7Z7M9 940 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 PIGXQ8TBF5 258 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 PIK3IP1Q96FE7 263 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ZC3HAV1LQ96H79 300 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 TMEM19Q96HH6 336 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ACTR6Q9GZN1 396 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 OSGIN1Q9UJX0 560 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ING1Q9UK53 422 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ZNF443Q9Y2A4 671 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 PRRC2AP48634 2157 aaKnown RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-205ENST00000553300 EVPLLA8MZ36 301 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 C5orf58C9J3I9 102 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 NR5A2O00482 541 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 AP3D1O14617 1153 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 GCM2O75603 506 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 ETS2P15036 469 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 HOXB9P17482 250 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 FPR1P21462 350 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 CXCR1P25024 350 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 TACR3P29371 465 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 SLC35A1P78382 337 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 ITGADQ13349 1161 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 DEFB113Q30KQ7 82 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 AGKQ53H12 422 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 SFRP5Q5T4F7 317 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 METTL21CQ5VZV1 264 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 ABLIM2Q6H8Q1 611 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 ZNF836Q6ZNA1 936 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 VRK2Q86Y07 508 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 BBS10Q8TAM1 723 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 TSPEARQ8WU66 669 aa11.68□□□□□ -0.54
HNRNPC-205ENST00000553300 HSD17B8Q92506 261 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms