RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 ULBP3Q9BZM4 244 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 OR11A1Q9GZK7 315 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 PITHD1Q9GZP4 211 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-215ENST00000552823 SEMA6CQ9H3T2 930 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 SIAEQ9HAT2 523 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 SCML1Q9UN30 329 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 CMAHPQ9Y471 501 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ZFHX2Q9C0A1 2572 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ALPK3Q96L96 1907 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FREM2Q5SZK8 3169 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ANKRD33BA6NCL7 494 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SHISA7A6NL88 538 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TNFRSF10CO14798 259 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SMAD9O15198 467 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ARHGEF9O43307 516 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TBX19O60806 448 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 KCNJ13O60928 360 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 KRT8P05787 483 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MSL3P1P0C860 447 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EDNRAP25101 427 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SRP9P49458 86 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FXYD6P3P58550 94 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CTXN1P60606 82 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EEF1A1P68104 462 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RHAGQ02094 409 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ELOAQ14241 798 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EIPR1Q53HC9 387 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 HES5Q5TA89 166 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 BICRALQ6AI39 1079 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 LEG1Q6P5S2 330 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 APOOLQ6UXV4 268 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 PRSS45Q7RTY3 260 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 BCORP1Q8N888 145 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 THEM6Q8WUY1 208 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RFKQ969G6 155 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TM4SF19Q96DZ7 209 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 COQ7Q99807 217 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF350Q9GZX5 532 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FKRPQ9H9S5 495 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MKKSQ9NPJ1 570 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FKBP14Q9NWM8 211 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EXTL2Q9UBQ6 330 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CTSFQ9UBX1 484 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ACAD8Q9UKU7 415 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 POMT2Q9UKY4 750 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 DIMT1Q9UNQ2 313 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 KLK4Q9Y5K2 254 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 HS3ST3A1Q9Y663 406 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RNF215Q9Y6U7 377 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TEX13CA0A0J9YWL9 993 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EIF1AYO14602 144 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ALOX12BO75342 701 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RCBTB2O95199 551 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 F10P00742 488 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SLC35E2P0CK97 266 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 OR8G3PP0DMU2 310 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SMIM10L1P0DMW3 83 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TFPIP10646 304 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 IL7P13232 177 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SNRPBP14678 240 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FPR3P25089 353 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CD97P48960 835 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FNTBP49356 437 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 PLAURQ03405 335 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MGAT2Q10469 447 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MLLT11Q13015 90 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MLC1Q15049 377 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 OCLNQ16625 522 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 DECR1Q16698 335 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SLC25A35Q3KQZ1 300 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MEDAGQ5VYS4 303 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FAM199XQ6PEV8 388 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SLC35D2Q76EJ3 337 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MEPCEQ7L2J0 689 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 AKAP14Q86UN6 197 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 GKN2Q86XP6 184 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SAMD14Q8IZD0 417 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 OR5W2Q8NH69 310 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 NT5CQ8TCD5 201 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 PPP1R14AQ96A00 147 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF775Q96BV0 537 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SGTBQ96EQ0 304 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SMIM10Q96HG1 83 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MOGAT1Q96PD6 335 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 GTPBP2Q9BX10 602 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RTN4RQ9BZR6 473 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TRIM2Q9C040 744 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FAM117AQ9C073 453 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 C11orf54Q9H0W9 315 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 MIXL1Q9H2W2 232 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 AKIRIN1Q9H9L7 192 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 B3GAT2Q9NPZ5 323 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FBXO8Q9NRD0 319 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CUTCQ9NTM9 273 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RASD1Q9Y272 281 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 LSM2Q9Y333 95 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF106Q9H2Y7 1883 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 FAM240BA0A1B0GVZ2 78 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 TMEM72A0PK05 275 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms