RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ARPINQ7Z6K5 226 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 LUZP2Q86TE4 346 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 DDIT4LQ96D03 193 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 ZHX1-C8orf76Q96EF9 292 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 GMPPAQ96IJ6 420 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 SRXN1Q9BYN0 137 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 ENKD1Q9H0I2 346 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 PIF1Q9H611 641 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 SLC24A3Q9HC58 644 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 GLRX2Q9NS18 164 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 OSGIN1Q9UJX0 560 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 TMED7Q9Y3B3 224 aa16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 UTP20O75691 2785 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-216ENST00000552301 SULT2B1O00204 365 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 FRS3O43559 492 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 TNFSF13O75888 250 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 CPOXP36551 454 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 ACAA2P42765 397 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 MAP2K6P52564 334 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 RGS8P57771 180 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 RAC3P60763 192 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 VMACQ2NL98 169 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 ERICH5Q6P6B1 374 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 TMPPEQ6ZT21 453 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 FCRLAQ7L513 359 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 FAM214BQ7L5A3 538 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 PATL1Q86TB9 770 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 ADGRG3Q86Y34 549 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 KIF18BQ86Y91 864 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 SLC26A7Q8TE54 656 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 ROBO4Q8WZ75 1007 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 CMTM5Q96DZ9 223 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 RBM24Q9BX46 236 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 CLEC4AQ9UMR7 237 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 PROCRQ9UNN8 238 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 AP3M1Q9Y2T2 418 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 HDGFL3Q9Y3E1 203 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 CHST2Q9Y4C5 530 aa16.54■□□□□ 0.24
PRPF40B-216ENST00000552301 SYT5O00445 386 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 MSTNO14793 375 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 PRG2P13727 222 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 ENPP1P22413 925 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 DIO1P49895 249 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 PCBP3P57721 371 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 RNPS1Q15287 305 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 GDF7Q7Z4P5 450 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 TREML1Q86YW5 311 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 SLC43A2Q8N370 569 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 RNF128Q8TEB7 428 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 OR11A1Q9GZK7 315 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 EFCAB1Q9HAE3 211 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 ARL2BPQ9Y2Y0 163 aa16.53■□□□□ 0.24
PRPF40B-216ENST00000552301 TMEM72A0PK05 275 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 M0QX08 132 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 ZNF208O43345 1280 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 SS18L1O75177 396 aaPredicted RBP16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 MFN2O95140 757 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 OPN1SWP03999 348 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 FESP07332 822 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 IGFBP2P18065 325 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 KIR2DL2P43627 348 aaPredicted RBP16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 NUDT2P50583 147 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 HOXC5Q00444 222 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 DMTNQ08495 405 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 MYBPHQ13203 477 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 TMEM201Q5SNT2 666 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 BTLAQ7Z6A9 289 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 DMRTC2Q8IXT2 367 aaPredicted RBP16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 SMYD1Q8NB12 490 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 OR6K3Q8NGY3 331 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 ABHD3Q8WU67 409 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 STARD4Q96DR4 205 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 ADAM19Q9H013 955 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 MYLK2Q9H1R3 596 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 EVA1AQ9H8M9 152 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 SELENONQ9NZV5 590 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 JKAMPQ9P055 326 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 KLHL9Q9P2J3 617 aa16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 TESQ9UGI8 421 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-216ENST00000552301 IGHV3-15A0A0B4J1V0 119 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 FAM220BPB1ANY3 271 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 TPST1O60507 370 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 DCTN3O75935 186 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 PRKD3O94806 890 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 PMS2P2O95744 297 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 PRDX6P30041 224 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 KCNJ5P48544 419 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 OR2B6P58173 313 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 RANBP3LQ86VV4 465 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 CALHM3Q86XJ0 350 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 ACBD4Q8NC06 268 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 OR2T12Q8NG77 320 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 OR52E4Q8NGH9 312 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 RASSF5Q8WWW0 418 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 DNAJA3Q96EY1 480 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 ARL5BQ96KC2 179 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 TACO1Q9BSH4 297 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms