RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZNF442Q9H7R0 627 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 DDX28Q9NUL7 540 aaKnown RBP13.27□□□□□ -0.29
CACNB3-220ENST00000551716 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 ARMCX1Q9P291 453 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 POLR3HQ9Y535 204 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-220ENST00000551716 TIMM22Q9Y584 194 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 NOTCH1P46531 2555 aa13.27□□□□□ -0.29
CACNB3-220ENST00000551716 IGHV1-18A0A0C4DH31 117 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 hCG_2039718K7EN88 272 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 KLF11O14901 512 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ZSCAN12O43309 604 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 EIF1BO60739 113 aaKnown RBP13.26□□□□□ -0.29
CACNB3-220ENST00000551716 TBX19O60806 448 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 DNAJA2O60884 412 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 PNPP00491 289 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 HKR1P10072 659 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 NPR2P20594 1047 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 IMPDH1P20839 514 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 PHBP35232 272 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 SESN3P58005 492 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ADRM1Q16186 407 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 TEX35Q5T0J7 233 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ANKRD16Q6P6B7 361 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 THSD4Q6ZMP0 1018 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 TMEM151AQ8N4L1 468 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 POMGNT2Q8NAT1 580 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 CDS1Q92903 461 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 PPCDCQ96CD2 204 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ZNF317Q96PQ6 595 aaPredicted RBP13.26□□□□□ -0.29
CACNB3-220ENST00000551716 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
CACNB3-220ENST00000551716 LAT2Q9GZY6 243 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 DYNLRB1Q9NP97 96 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 RRAGDQ9NQL2 400 aaPredicted RBP13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ACER3Q9NUN7 267 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 TMEM45AQ9NWC5 275 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 TRAPPC4Q9Y296 219 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
CACNB3-220ENST00000551716 ESPNB1AK53 854 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 RSL1D1O76021 490 aaKnown RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 HMGN2P05204 90 aaKnown RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 INHBAP08476 426 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 KRT16P08779 473 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 FRKP42685 505 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 SERPINB9P50453 376 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 UBE2NP61088 152 aaKnown RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 NAAAQ02083 359 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 POU3F1Q03052 451 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 OCLNQ16625 522 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 TSPO2Q5TGU0 170 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 FAM219BQ5XKK7 198 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 TRIM46Q7Z4K8 759 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 BPIFB2Q8N4F0 458 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 ZNF614Q8N883 585 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 ADAMTS15Q8TE58 950 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 CIDECQ96AQ7 238 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 ZNF524Q96C55 264 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 REEP4Q9H6H4 257 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 SH3BP4Q9P0V3 963 aa13.25□□□□□ -0.29
CACNB3-220ENST00000551716 UTP11Q9Y3A2 253 aaKnown RBP13.25□□□□□ -0.29
CACNB3-220ENST00000551716 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 NPIPB9F8W1W9 429 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 H3BQF6 201 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 SBK3P0C264 359 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 FPR2P25090 351 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 TMEM33P57088 247 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 MRPS25P82663 173 aaKnown RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 H3F3AP84243 136 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 NDUFAF6Q330K2 333 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 SLC9B1Q4ZJI4 515 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 HIKESHIQ53FT3 197 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 DCST2Q5T1A1 773 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 REP15Q6BDI9 236 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 CDC73Q6P1J9 531 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 SPATA21Q7Z572 469 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 CCDC103Q8IW40 242 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 ZCCHC24Q8N2G6 241 aaKnown RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 CLDND2Q8NHS1 167 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 OTUB1Q96FW1 271 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 EGLN2Q96KS0 407 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 NAA11Q9BSU3 229 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 ACTRT3Q9BYD9 372 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 CRNNQ9UBG3 495 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 FAF1Q9UNN5 650 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-220ENST00000551716 FLVCR1Q9Y5Y0 555 aa13.24□□□□□ -0.29
CACNB3-220ENST00000551716 SEC22BO75396 215 aa13.23□□□□□ -0.29
CACNB3-220ENST00000551716 ADRA2AP08913 450 aa13.23□□□□□ -0.29
CACNB3-220ENST00000551716 GAAP10253 952 aa13.23□□□□□ -0.29
CACNB3-220ENST00000551716 SAGP10523 405 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms