RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MTFR2Q6P444 385 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SMARCD3Q6STE5 483 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SBSNQ6UWP8 590 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 UNQ6494/PRO21346Q6UXR6 183 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NHLRC1Q6VVB1 395 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC29A4Q7RTT9 530 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CTU1Q7Z7A3 348 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ACOT1Q86TX2 421 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TGIF2LXQ8IUE1 241 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PAQR4Q8N4S7 273 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PCSK9Q8NBP7 692 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FBXO15Q8NCQ5 510 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 DNAAF1Q8NEP3 725 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR9A4Q8NGU2 314 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NEIL3Q8TAT5 605 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ARRDC2Q8TBH0 407 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CD200R1Q8TD46 325 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 GEMIN6Q8WXD5 167 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM168AQ92567 244 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 EDAQ92838 391 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 EXT2Q93063 718 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 KISS1RQ969F8 398 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SLAMF9Q96A28 289 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MYEOVQ96EZ4 313 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CMTM7Q96FZ5 175 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 IL4I1Q96RQ9 567 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NRIP2Q9BQI9 281 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NAA11Q9BSU3 229 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SPRTNQ9H040 489 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 LRRN3Q9H3W5 708 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM38AQ9H6F2 299 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM27Q9HBJ8 222 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NMRK2Q9NPI5 230 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 STARD7Q9NQZ5 370 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MMP26Q9NRE1 261 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 UQCC1Q9NVA1 299 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ELOVL2Q9NXB9 296 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 STOX2Q9P2F5 926 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF624Q9P2J8 865 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FBLN5Q9UBX5 448 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TNFSF18Q9UNG2 199 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ST3GAL5Q9UNP4 418 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FLVCR2Q9UPI3 526 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CORO2BQ9UQ03 480 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PCDHB1Q9Y5F3 818 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PPP2R3BQ9Y5P8 575 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MTCH2Q9Y6C9 303 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 GBF1Q92538 1859 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MYLKQ15746 1914 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CITO14578 2027 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 WDR81Q562E7 1941 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TRBV23OR9-2A0A075B6M9 112 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 A0A087WUJ7 227 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TRBV6-7A0A0A0MS04 114 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TRAV1-2A0A0B4J238 106 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM272A0A1B0GTI8 110 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ANKRD20A5PA0PJZ0 165 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SMIM30A4D0T7 59 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 LRIT2A6NDA9 550 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MAGEB17A8MXT2 336 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ANHXE9PGG2 379 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 E9PI62 339 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 FAAHO00519 579 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PCDH7O60245 1069 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CREBL2O60519 120 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TSPAN3O60637 253 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CRTAPO75718 401 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 KLHL18O94889 574 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MT-ND4P03905 459 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CD74P04233 296 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 IGFBP1P08833 259 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ETFAP13804 333 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MYOGP15173 224 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 EPORP19235 508 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB5AP20339 215 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PRPS1L1P21108 318 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 XPAP23025 273 aaPredicted RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ACKR3P25106 362 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CERS1P27544 350 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 HTR2AP28223 471 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 NDUFS1P28331 727 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SHC1P29353 583 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PDHA2P29803 388 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 CRATP43155 626 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 MAPK9P45984 424 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RABIFP47224 123 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 PPT1P50897 306 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB5CP51148 216 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 ART1P52961 327 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 UCP2P55851 309 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 LSM6P62312 80 aaKnown RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SRSF3P84103 164 aaKnown RBP4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 HMGCS1Q01581 520 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 TNFRSF9Q07011 255 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 LAMTOR4Q0VGL1 99 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 SQSTM1Q13501 440 aa4.88□□□□□ -1.63
LSM3P2-201ENST00000551246 RGNQ15493 299 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms