RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PRORSD1PA6NEY8 169 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 FXYD1O00168 92 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 MRASO14807 208 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 ZNF208O43345 1280 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 DNPH1O43598 174 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 SERPINB7O75635 380 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 CGAP01215 116 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 GKN3PP0CG01 181 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 TACR3P29371 465 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 LSP1P33241 339 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 ACAA2P42765 397 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 CTBP2P56545 445 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 PCBP3P57721 371 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 COPZ1P61923 177 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 CSNK2A1P68400 391 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 FCRLAQ7L513 359 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 BTLAQ7Z6A9 289 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 ADGRG3Q86Y34 549 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 CLIP4Q8N3C7 705 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 PCYOX1LQ8NBM8 494 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 LRRC58Q96CX6 371 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 ZNF607Q96SK3 696 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 ADAM19Q9H013 955 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 GALNT8Q9NY28 637 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 PROCRQ9UNN8 238 aa13.78□□□□□ -0.2
PRPF40B-211ENST00000551063 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 ENPP1P22413 925 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 KIR2DL3P43628 341 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 DIO1P49895 249 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 MYBPHQ13203 477 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 NANOGP8Q6NSW7 305 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 ZZZ3Q8IYH5 903 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 ABHD3Q8WU67 409 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 DDIT4LQ96D03 193 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 EVA1AQ9H8M9 152 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 NANOGQ9H9S0 305 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 ARMCX1Q9P291 453 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 KLHL13Q9P2N7 655 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 CLEC4AQ9UMR7 237 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 APCP25054 2843 aa13.77□□□□□ -0.21
PRPF40B-211ENST00000551063 MED12LQ86YW9 2145 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 HCFC1P51610 2035 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 TMEM72A0PK05 275 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 SULT2B1O00204 365 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 KRT34O76011 436 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 PRKD3O94806 890 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 PMS2P2O95744 297 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 TFPIP10646 304 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 PRG2P13727 222 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 AQP1P29972 269 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 AGTR1P30556 359 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 PCGF2P35227 344 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 CPOXP36551 454 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 SEC24CP53992 1094 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 TLE4Q04727 773 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 TMEM201Q5SNT2 666 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 INTS11Q5TA45 600 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 ARMC8Q8IUR7 673 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 OR10A6Q8NH74 314 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 FAM222BQ8WU58 562 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 ZHX1-C8orf76Q96EF9 292 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 ELAC2Q9BQ52 826 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 ZNF559Q9BR84 538 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 BCO1Q9HAY6 547 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 GID8Q9NWU2 228 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 KLHL28Q9NXS3 571 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 ELOVL5Q9NYP7 299 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 KLHL9Q9P2J3 617 aa13.76□□□□□ -0.21
PRPF40B-211ENST00000551063 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 TUBAL3A6NHL2 446 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 SMAD9O15198 467 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 SNX3O60493 162 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 CYTIPO60759 359 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 MFN2O95140 757 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 FESP07332 822 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 DRD4P21917 467 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 CD79BP40259 229 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 GZMMP51124 257 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 VMACQ2NL98 169 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 ABLIM2Q6H8Q1 611 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 ZNF474Q6S9Z5 364 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 PATL1Q86TB9 770 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 CADM2Q8N3J6 435 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 C3orf49Q96BT1 292 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 ARL5BQ96KC2 179 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 PSD2Q9BQI7 771 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 OR11A1Q9GZK7 315 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms