RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TESCQ96BS2 214 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 ZC3HAV1LQ96H79 300 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 LOXL4Q96JB6 756 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 SECISBP2Q96T21 854 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 CNN2Q99439 309 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 ACTR6Q9GZN1 396 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 TNFRSF12AQ9NP84 129 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 YARS2Q9Y2Z4 477 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
NR4A1-215ENST00000550557 SLC22A7Q9Y694 548 aa11.33□□□□□ -0.6
NR4A1-215ENST00000550557 LOC105369274A0A096LPK9 316 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 A0A1B0GTQ1 180 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SERINC4A6NH21 518 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CCRL2O00421 344 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PHYHO14832 338 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 JRKO75564 520 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 TNFRSF1BP20333 461 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 POU4F2Q12837 409 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SELPLGQ14242 412 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ANKDD1AQ495B1 522 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 LANCL3Q6ZV70 420 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF227Q86WZ6 799 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PTRH1Q86Y79 214 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 OR4N4Q8N0Y3 316 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CPT1CQ8TCG5 803 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 TMEM80Q96HE8 168 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 IGHV1OR21-1A0A087WYE8 117 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PPP1R3DO95685 299 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PSKH1P11801 424 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 HOXB9P17482 250 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CDKN2CP42773 168 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 FASLGP48023 281 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 HBA1P69905 142 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MAB21L1Q13394 359 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SYPL1Q16563 259 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF691Q5VV52 312 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 GATAD2BQ8WXI9 593 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CPNE5Q9HCH3 593 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MGAT4AQ9UM21 535 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MRPS14O60783 128 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ITGAMP11215 1152 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 F8A1P23610 371 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CRISP1P54107 249 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SNU13P55769 128 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CXADRP78310 365 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 TRAPPC6BQ86SZ2 158 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PAPD5Q8NDF8 572 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CHPT1Q8WUD6 406 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 DPAGT1Q9H3H5 408 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SMURF1Q9HCE7 757 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CMAHPQ9Y471 501 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 EIF1BO60739 113 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 RLN2P04090 185 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CHRM4P08173 479 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 FCGR2AP12318 317 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 CD40LGP29965 261 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PYCR1P32322 319 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 PCGF2P35227 344 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 RPS5P46782 204 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 POLR2HP52434 150 aaKnown RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 EMX1Q04741 257 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 VEZF1Q14119 521 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 WDR20Q8TBZ3 569 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MUL1Q969V5 352 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MS4A6EQ96DS6 147 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 C16orf58Q96GQ5 468 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 MALT1Q9UDY8 824 aa11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF223Q9UK11 482 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ZNF443Q9Y2A4 671 aaPredicted RBP11.32□□□□□ -0.6
NR4A1-215ENST00000550557 ANKRD30BLA7E2S9 258 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 RAD51DO75771 328 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 APOL3O95236 402 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 UQCRC1P31930 480 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 DRD3P35462 400 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 FAM53BQ14153 422 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SEC23BQ15437 767 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TSC22D1Q15714 1073 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 TRIM46Q7Z4K8 759 aa11.31□□□□□ -0.6
NR4A1-215ENST00000550557 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms