RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ME2P23368 584 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 EIF1AXP47813 144 aaKnown RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 CRISP3P54108 245 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 NKX6-1P78426 367 aaPredicted RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 CHRNEQ04844 493 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 GPAT3Q53EU6 434 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 TYW3Q6IPR3 259 aaKnown RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 FAM156AQ8NDB6 213 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 OIT3Q8WWZ8 545 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 CLPTM1LQ96KA5 538 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 SMR3AQ99954 134 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 PRRG4Q9BZD6 226 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 MTHFD2LQ9H903 347 aaPredicted RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
NUP188-211ENST00000550219 ZNF226Q9NYT6 803 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 CLEC4AQ9UMR7 237 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 PROCRQ9UNN8 238 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 ZNF175Q9Y473 711 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 WDR45Q9Y484 360 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
NUP188-211ENST00000550219 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 C5orf58C9J3I9 102 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 SIAH2O43255 324 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 PDE5AO76074 875 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 AQP8O94778 261 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 OXSR1O95747 527 aaPredicted RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 PLGP00747 810 aaPredicted RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 OPN1LWP04000 364 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 NGFRP08138 427 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 ETS2P15036 469 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 RPS4Y1P22090 263 aaKnown RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 UGT2B10P36537 528 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 BNIP2Q12982 314 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 TRIM25Q14258 630 aaKnown RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 ZNF141Q15928 474 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 INTS11Q5TA45 600 aaKnown RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 APOOLQ6UXV4 268 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 OLIG3Q7RTU3 272 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 GGNQ86UU5 652 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 ZNF619Q8N2I2 560 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 ZNF610Q8N9Z0 462 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 BBS10Q8TAM1 723 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 ZG16BQ96DA0 208 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 SH3YL1Q96HL8 342 aaPredicted RBP12.02□□□□□ -0.49
NUP188-211ENST00000550219 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 HOXD1Q9GZZ0 328 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 MUC13Q9H3R2 512 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 TMEM185BQ9H7F4 350 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 GORASP2Q9H8Y8 452 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 RNF122Q9H9V4 155 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 KCNE5Q9UJ90 142 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 ANGPT4Q9Y264 503 aa12.02□□□□□ -0.49
NUP188-211ENST00000550219 MED12LQ86YW9 2145 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 AGAP5A6NIR3 686 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 DEFB108AA8MXU0 73 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 LINC01387J3KSC0 135 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 CXCR6O00574 342 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 ACOT8O14734 319 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 NDUFB5O43674 189 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 SMPD2O60906 423 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 FCGR2AP12318 317 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 FOSL1P15407 271 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 TCN1P20061 433 aaPredicted RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 ATP6V1C1P21283 382 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 TBXA2RP21731 343 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 CRYGSP22914 178 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 HOXC12P31275 282 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 KDELR2P33947 212 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 MSX2P35548 267 aaPredicted RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 RNF144AP50876 292 aaPredicted RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 CRYBA2P53672 197 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 ATP12AP54707 1039 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 HPCAP84074 193 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 MS4A2Q01362 244 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 TRAP1Q12931 704 aaKnown RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 KRTAP21-3Q3LHN1 58 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 RPS26P11Q5JNZ5 115 aaPredicted RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 Q5PR19 223 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 PATL1Q86TB9 770 aaKnown RBP12.01□□□□□ -0.49
NUP188-211ENST00000550219 P3H2Q8IVL5 708 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 OR52E4Q8NGH9 312 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 OR4C3Q8NH37 302 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 MCUR1Q96AQ8 359 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 ASB9Q96DX5 294 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 C18orf12Q96KH6 178 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 RNF145Q96MT1 663 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 CCL19Q99731 98 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 NPAS1Q99742 590 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 PCDHAC1Q9H158 963 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 UBQLN4Q9NRR5 601 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 ACTR3BQ9P1U1 418 aa12.01□□□□□ -0.49
NUP188-211ENST00000550219 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms