RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 IL7RP16871 459 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 ADSLP30566 484 aaPredicted RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 STK11Q15831 433 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 ABLIM2Q6H8Q1 611 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 Q6ZT83 130 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 BHLHA15Q7RTS1 189 aaPredicted RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 YTHDF3Q7Z739 585 aaKnown RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 GALNT5Q7Z7M9 940 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 BIVMQ86UB2 503 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 MTDHQ86UE4 582 aaKnown RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 ADGRG3Q86Y34 549 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 CMIPQ8IY22 773 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 ZNF100Q8IYN0 542 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 OR9I1Q8NGQ6 314 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 PIWIL2Q8TC59 973 aaKnown RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 HSD17B8Q92506 261 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 AKAP1Q92667 903 aaKnown RBP eCLIP14.47□□□□□ -0.09
VPS29-207ENST00000549970 ZHX1-C8orf76Q96EF9 292 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 Q96MF0 132 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 TMEM204Q9BSN7 226 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 POTEKPQ9BYX7 375 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 MTHFD2LQ9H903 347 aaPredicted RBP14.47□□□□□ -0.09
VPS29-207ENST00000549970 ZIM2Q9NZV7 527 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 EMC3Q9P0I2 261 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 HDGFL3Q9Y3E1 203 aa14.47□□□□□ -0.09
VPS29-207ENST00000549970 USF3Q68DE3 2245 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 TMED7-TICAM2A0A0A6YYA0 188 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 HS3ST1O14792 307 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 UBDO15205 165 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 PMS2P2O95744 297 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 RPS4Y1P22090 263 aaKnown RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 CRATP43155 626 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 GNA13Q14344 377 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 GSTA3Q16772 222 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 GTDC1Q4AE62 458 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 MRPL2Q5T653 305 aaKnown RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 Q71RC1 249 aaPredicted RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 ATG4DQ86TL0 474 aaPredicted RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 TMEM171Q8WVE6 324 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 AURKBQ96GD4 344 aaPredicted RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 POM121Q96HA1 1249 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 NGBQ9NPG2 151 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 SDR39U1Q9NRG7 319 aaPredicted RBP14.46□□□□□ -0.09
VPS29-207ENST00000549970 P2RX2Q9UBL9 471 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 TMED7Q9Y3B3 224 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 RNF115Q9Y4L5 304 aa14.46□□□□□ -0.09
VPS29-207ENST00000549970 NIPBLQ6KC79 2804 aaeCLIP14.46□□□□□ -0.1
VPS29-207ENST00000549970 TMEM72A0PK05 275 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 CFAP73A6NFT4 308 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 ZNF716A6NP11 495 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 KLF11O14901 512 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 IGHV3-9P01782 118 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 BCHEP06276 602 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 DBIP07108 87 aaKnown RBP14.45□□□□□ -0.1
VPS29-207ENST00000549970 CD3EP07766 207 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 ETFAP13804 333 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 IGHV1-2P23083 117 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 TACR3P29371 465 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 HTR3AP46098 478 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 PTH2RP49190 550 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 POLR2HP52434 150 aaKnown RBP14.45□□□□□ -0.1
VPS29-207ENST00000549970 POLR2JP52435 117 aaKnown RBP14.45□□□□□ -0.1
VPS29-207ENST00000549970 MVDP53602 400 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 OR2B6P58173 313 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 MAPK11Q15759 364 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 C6orf10Q5SRN2 563 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 NCMAPQ5T1S8 102 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 PRSS57Q6UWY2 283 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 CCDC103Q8IW40 242 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 PEX5LQ8IYB4 626 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 ZNF611Q8N823 705 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 PIGXQ8TBF5 258 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 VPS33AQ96AX1 596 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 ESRP2Q9H6T0 727 aaKnown RBP14.45□□□□□ -0.1
VPS29-207ENST00000549970 RMND5AQ9H871 391 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 TPT1P8Q9HAU6 139 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 RLIMQ9NVW2 624 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 OSGIN1Q9UJX0 560 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 NOSIPQ9Y314 301 aaKnown RBP14.45□□□□□ -0.1
VPS29-207ENST00000549970 USH1CQ9Y6N9 552 aa14.45□□□□□ -0.1
VPS29-207ENST00000549970 IGKV3D-15A0A087WSY6 115 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 H7C1Q1 480 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 RAMP1O60894 148 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 UQCRBP14927 111 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 FKBP2P26885 142 aaKnown RBP14.44□□□□□ -0.1
VPS29-207ENST00000549970 CLK1P49759 484 aaKnown RBP14.44□□□□□ -0.1
VPS29-207ENST00000549970 DSTNP60981 165 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 EPS8Q12929 822 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 PDK3Q15120 406 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 PPA1Q15181 289 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 RPS26P11Q5JNZ5 115 aaPredicted RBP14.44□□□□□ -0.1
VPS29-207ENST00000549970 MSANTD1Q6ZTZ1 278 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 VRK2Q86Y07 508 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 UBE2J2Q8N2K1 259 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 MIER2Q8N344 545 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 CIARTQ8N365 385 aaPredicted RBP14.44□□□□□ -0.1
VPS29-207ENST00000549970 OR52P1PQ8NH57 321 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 IGFBPL1Q8WX77 278 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 PMM1Q92871 262 aa14.44□□□□□ -0.1
VPS29-207ENST00000549970 APH1AQ96BI3 265 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms