RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ANGPTL3Q9Y5C1 460 aa3.4□□□□□ -1.86
APAF1-208ENST00000549007 CLCA3PQ9Y6N3 262 aa3.4□□□□□ -1.86
APAF1-208ENST00000549007 MN1Q10571 1320 aaPredicted RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 A0A0J9YY10 115 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 TLCD2A6NGC4 264 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 TMEM150CB9EJG8 249 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 P2RX6O15547 441 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 LCMT2O60294 686 aaKnown RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 GMNNO75496 209 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 SOX30O94993 753 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 NUDT3O95989 172 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 GP1BAP07359 652 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 CHRNGP07510 517 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 ERGP11308 486 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 CPA3P15088 417 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 ALDH3A1P30838 453 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 ARRB2P32121 409 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 MNDAP41218 407 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 SLC6A12P48065 614 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 ZNF81P51508 661 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 AP1S2P56377 157 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 KIR2DS3Q14952 304 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 UNC50Q53HI1 259 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 XKR6Q5GH73 641 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 TNFAIP8L3Q5GJ75 292 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 NDUFAF5Q5TEU4 345 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 SULT1C3Q6IMI6 304 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 C17orf64Q86WR6 236 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 RAB42Q8N4Z0 105 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 OR6C4Q8NGE1 309 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 OR4D9Q8NGE8 314 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 SCMH1Q96GD3 660 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 NAF1Q96HR8 494 aaKnown RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 QRFPRQ96P65 431 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 UCK1Q9HA47 277 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 OPTCQ9UBM4 332 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 DCDC2Q9UHG0 476 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 PCTPQ9UKL6 214 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 RNF11Q9Y3C5 154 aa3.4□□□□□ -1.87
APAF1-208ENST00000549007 COL5A1P20908 1838 aaPredicted RBP3.4□□□□□ -1.87
APAF1-208ENST00000549007 ACACAQ13085 2346 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ELOVL7A1L3X0 281 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SYCE1LA8MT33 242 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SAP18O00422 153 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZW10O43264 779 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 WDR1O75083 606 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 WDPCPO95876 746 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ALPPP05187 535 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FGF3P11487 239 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 NEFHP12036 1026 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 TAC1P20366 129 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 BGNP21810 368 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CMPK1P30085 196 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CSTF2P33240 577 aaKnown RBP eCLIP3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLC26A3P40879 764 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ASCL1P50553 236 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 MMP15P51511 669 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CSNK1G2P78368 415 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CHIT1Q13231 466 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 GTF2H2Q13888 395 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 DOC2AQ14183 400 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RBBP5Q15291 538 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 CHI3L2Q15782 390 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PDK4Q16654 411 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 HKDC1Q2TB90 917 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 C1orf189Q5VU69 101 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 GTF2H2CQ6P1K8 395 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 WDR74Q6RFH5 385 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RTN4RL2Q86UN3 420 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 COMMD2Q86X83 199 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 BMPERQ8N8U9 685 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 NPEPL1Q8NDH3 523 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 KBTBD8Q8NFY9 601 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RHEBL1Q8TAI7 183 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PPP4R1Q8TF05 950 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 TMED6Q8WW62 240 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLC5A11Q8WWX8 675 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ABTB1Q969K4 478 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 PHF21AQ96BD5 680 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PPP1R36Q96LQ0 422 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RAB11FIP5Q9BXF6 653 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 MRPS2Q9Y399 296 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 TIMM22Q9Y584 194 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZNF860A6NHJ4 632 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 E5RGE8 158 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 E2F3O00716 465 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 UBFD1O14562 309 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 OR7A17O14581 309 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 WNT9BO14905 357 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 OR1F1O43749 312 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 OR4F21O95013 312 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 GSTA1P08263 222 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 NELFEP18615 380 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLC6A6P31641 620 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PCYT1AP49585 367 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms