RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
PTCH1-218ENST00000548945 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 TMEM160Q9NX00 188 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 ASIC5Q9NY37 505 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 CDC42EP3Q9UKI2 254 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
PTCH1-218ENST00000548945 ANK2Q01484 3957 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 TLDC2A0PJX2 215 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 HMGB1P1B2RPK0 211 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 E7EQL1 145 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 H7C417 338 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 KIAA0513O60268 411 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 FCMRO60667 390 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 UGT2B17O75795 530 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CYP7B1O75881 506 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 PMS2P2O95744 297 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 SLC25A16P16260 332 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 SOAT1P35610 550 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 PGM1P36871 562 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CLDN8P56748 225 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 RPS26P62854 115 aaKnown RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 VLDLRP98155 873 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 LOXL1Q08397 574 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 C6orf52Q5T4I8 152 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 AGBL2Q5U5Z8 902 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 UBE2J2Q8N2K1 259 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 TUBGCP3Q96CW5 907 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 MECRQ9BV79 373 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CCDC106Q9BWC9 280 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 SAP130Q9H0E3 1048 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CENPHQ9H3R5 247 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 ASB6Q9NWX5 421 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 TAS2R16Q9NYV7 291 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CHRNA9Q9UGM1 479 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 NOSIPQ9Y314 301 aaKnown RBP11.32□□□□□ -0.6
PTCH1-218ENST00000548945 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
PTCH1-218ENST00000548945 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 RNF103-CHMP3A0A140T963 221 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 CIB4A0PJX0 185 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 CCT8L1PA6NM43 557 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 RAD51DO75771 328 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 TFPIP10646 304 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 G6PDP11413 515 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 CD40P25942 277 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 EMX2Q04743 252 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 RAB35Q15286 201 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-218ENST00000548945 MUC15Q8N387 334 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 ZBTB9Q96C00 473 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 AMBRA1Q9C0C7 1298 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
PTCH1-218ENST00000548945 NOP53Q9NZM5 478 aaKnown RBP11.31□□□□□ -0.6
PTCH1-218ENST00000548945 SLC17A7Q9P2U7 560 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 ZDHHC2Q9UIJ5 367 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 TRAPPC4Q9Y296 219 aa11.31□□□□□ -0.6
PTCH1-218ENST00000548945 FAM234BA2RU67 622 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 GPRIN2O60269 458 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
PTCH1-218ENST00000548945 SKAP2O75563 359 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-218ENST00000548945 CSF3P09919 207 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 BMP4P12644 408 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 ARRB2P32121 409 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 MAGEA8P43361 318 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 HTR3AP46098 478 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 ZNF83P51522 516 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 MAP2K6P52564 334 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms