RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 EPCAMP16422 314 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SLC2A5P22732 501 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 GDI2P50395 445 aaKnown RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ERVK-21P61565 698 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 METTL11BQ5VVY1 283 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 HEPHL1Q6MZM0 1159 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 BAIAP2L2Q6UXY1 529 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 OR7G2Q8NG99 324 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 TRAPPC13A5PLN9 417 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 PRAF2O60831 178 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ASGR2P07307 311 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 NMBP08949 121 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ST8SIA6P61647 398 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 DHODHQ02127 395 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 GPR68Q15743 365 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 UBE2NLQ5JXB2 153 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 FAM69AQ5T7M9 428 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 OR5M10Q6IEU7 315 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 MFSD12Q6NUT3 480 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ASPGQ86U10 573 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 C12orf40Q86WS4 652 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 OR51A7Q8NH64 312 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 COL26A1Q96A83 441 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 FERD3LQ96RJ6 166 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 NANSQ9NR45 359 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF275Q9NSD4 429 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF69Q9UC07 566 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 RIIAD1A6NNX1 92 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 MID1O15344 667 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 LATO43561 262 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 PPP1R3DO95685 299 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ATP1B1P05026 303 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 PCCBP05166 539 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 PROS1P07225 676 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 NTHL1P78549 312 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 HTR4Q13639 388 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 MLF2Q15773 248 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 TCEAL5Q5H9L2 206 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 HES5Q5TA89 166 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 APOOLQ6UXV4 268 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 CFAP77Q6ZQR2 320 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 RANBP3LQ86VV4 465 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 NXPE3Q969Y0 559 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 COX14Q96I36 57 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SLC6A20Q9NP91 592 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SIGLEC7Q9Y286 467 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF780BQ9Y6R6 833 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 LGALS8O00214 317 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NUPL2O15504 423 aaKnown RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 RCBTB2O95199 551 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 UCHL1P09936 223 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 PTHLHP12272 177 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 KIAA1024LP59773 190 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 CDK5R1Q15078 307 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF77Q15935 545 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 RGS7BPQ6MZT1 257 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 DGLUCYQ7Z3D6 616 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 FAM71CQ8NEG0 241 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 TTLQ8NG68 377 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 OR2L5Q8NG80 312 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 COQ8AQ8NI60 647 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 DOK4Q8TEW6 326 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 BPIFA2Q96DR5 249 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SLC25A38Q96DW6 304 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SMIM19Q96E16 107 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SHARPINQ9H0F6 387 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SLC25A18Q9H1K4 315 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 CACYBPQ9HB71 228 aaKnown RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ZC4H2Q9NQZ6 224 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ING1Q9UK53 422 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NPIPA5A0A0B4J1W7 369 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NPIPA7E9PJI5 369 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 LYPD3O95274 346 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 SERPINA3P01011 423 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NPIPA8P0DM63 369 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 NDUFS1P28331 727 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 ZMYND11Q15326 602 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 OR1Q1Q15612 314 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 DUSP5Q16690 384 aa12.67□□□□□ -0.38
HDAC7-228ENST00000548938 FAM199XQ6PEV8 388 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 GLDNQ6ZMI3 551 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-228ENST00000548938 FBXW5Q969U6 566 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms