RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SMAD9O15198 467 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 POLR3GO15318 223 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 SIAH2O43255 324 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 ZNF208O43345 1280 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 KLF4O43474 513 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 EIF1BO60739 113 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 SMPD2O60906 423 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 TMCC2O75069 709 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 GCM2O75603 506 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 THBDP07204 575 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 CHRM4P08173 479 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 HOXC12P31275 282 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 SLC1A3P43003 542 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 OR3A2P47893 321 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 IDH2P48735 452 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 MRPL19P49406 292 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 IRX1P78414 480 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 NKX6-1P78426 367 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 C6orf10Q5SRN2 563 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 Q6ZT83 130 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 C22orf34Q6ZV56 151 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 NUFIP2Q7Z417 695 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 CXorf67Q86X51 503 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 ADGRG3Q86Y34 549 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 P3H2Q8IVL5 708 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 PNPT1Q8TCS8 783 aaKnown RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 WDR60Q8WVS4 1066 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 KISS1RQ969F8 398 aaPredicted RBP10.12□□□□□ -0.79
BEST3-209ENST00000548658 DDIT4LQ96D03 193 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 ATP6V1G3Q96LB4 118 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 OR52B2Q96RD2 323 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 TCF7L2Q9NQB0 619 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 CTPS2Q9NRF8 586 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 TMEM45AQ9NWC5 275 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 TMEM181Q9P2C4 612 aa10.12□□□□□ -0.79
BEST3-209ENST00000548658 IGKV3D-15A0A087WSY6 115 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 IGHV3-15A0A0B4J1V0 119 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 A0A0G2JPF8 293 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 HNRNPCL2B2RXH8 293 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 HNRNPCL1O60812 293 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 ADAP00813 363 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 TFPTP0C1Z6 253 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 RPS4Y1P22090 263 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 POLR2HP52434 150 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 DSTNP60981 165 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 COPZ1P61923 177 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 SLC35A1P78382 337 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 FOXD4Q12950 439 aaPredicted RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 FADDQ13158 208 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 LARS2Q15031 903 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 LIN52Q52LA3 116 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 COX20Q5RI15 118 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 MRPL2Q5T653 305 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 PRSS57Q6UWY2 283 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 THSD4Q6ZMP0 1018 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 MAVSQ7Z434 540 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 P2RY8Q86VZ1 359 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 WFDC8Q8IUA0 241 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 ZNF100Q8IYN0 542 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 OR52P1PQ8NH57 321 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 PIGXQ8TBF5 258 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 SLC38A5Q8WUX1 472 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 DYDC1Q8WWB3 177 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 CNOT9Q92600 299 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 S100PBPQ96BU1 408 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 CCL19Q99731 98 aa10.11□□□□□ -0.79
BEST3-209ENST00000548658 ESRP2Q9H6T0 727 aaKnown RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 ARGLU1Q9NWB6 273 aaPredicted RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 ING1Q9UK53 422 aaPredicted RBP10.11□□□□□ -0.79
BEST3-209ENST00000548658 TMED7-TICAM2A0A0A6YYA0 188 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 CDHR4A6H8M9 788 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 CLDN24A6NM45 220 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 ZNF814B7Z6K7 855 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
BEST3-209ENST00000548658 FESP07332 822 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 THBS1P07996 1170 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 TACR3P29371 465 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 MVDP53602 400 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 PRAMEF8Q5VWM4 474 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 PRAMEF7Q5VXH5 474 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
BEST3-209ENST00000548658 ZNF704Q6ZNC4 412 aaPredicted RBP10.1□□□□□ -0.79
BEST3-209ENST00000548658 HDXQ7Z353 690 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 VPS33AQ96AX1 596 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 MUCL1Q96DR8 90 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 PLPPR2Q96GM1 343 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 ARL5BQ96KC2 179 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 NAA11Q9BSU3 229 aaPredicted RBP10.1□□□□□ -0.79
BEST3-209ENST00000548658 CCDC28BQ9BUN5 200 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 POTEKPQ9BYX7 375 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 ADAM19Q9H013 955 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 RABEP2Q9H5N1 569 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 PARPBPQ9NWS1 579 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 OSGIN1Q9UJX0 560 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 NOSIPQ9Y314 301 aaKnown RBP10.1□□□□□ -0.79
BEST3-209ENST00000548658 IFT52Q9Y366 437 aa10.1□□□□□ -0.79
BEST3-209ENST00000548658 TMED7Q9Y3B3 224 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms