RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 EGFP01133 1207 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 HPNP05981 417 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR2F1Q13607 317 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PCBP1Q15365 356 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 NHSL2Q5HYW2 709 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PIP5KL1Q5T9C9 394 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 AMIGO3Q86WK7 504 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 NAGSQ8N159 534 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SLC43A2Q8N370 569 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 KCTD12Q96CX2 325 aaKnown RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 ARSGQ96EG1 525 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 MACROD1Q9BQ69 325 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PLK3Q9H4B4 646 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SLC2A8Q9NY64 477 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SPATA31C2B4DYI2 1134 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 M0QZK8 103 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PMP2P02689 132 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 AADACP22760 399 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 RPUSD3Q6P087 351 aaKnown RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SPRED1Q7Z699 444 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 ANKLE1Q8NAG6 615 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR52N2Q8NGI0 321 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 RHEBL1Q8TAI7 183 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 ANKRD9Q96BM1 317 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SORCS2Q96PQ0 1159 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 G6PC3Q9BUM1 346 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 GORASP2Q9H8Y8 452 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 MED9Q9NWA0 146 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 YJEFN3A6XGL0 299 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 G3V2L1 256 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 M0QYG6 137 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 M0R3H8 397 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CNMDO75829 334 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 MPGP29372 298 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PCGF2P35227 344 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 HIST1H3AP68431 136 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CHRNEQ04844 493 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CAMK2DQ13557 499 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF528Q3MIS6 628 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 DHRS11Q6UWP2 260 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF620Q6ZNG0 422 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR14L1PQ8NHC6 308 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 FAM71F1Q96KD3 344 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 UBQLN4Q9NRR5 601 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 GPR173Q9NS66 373 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 BACE2Q9Y5Z0 518 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 TRAPPC6AO75865 159 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 UBL3O95164 117 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 DHPSP49366 369 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CLDN12P56749 244 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 SELENBP1Q13228 472 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CCINQ13939 588 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PRAMEF9Q5VWM5 478 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR2A2Q6IF42 318 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 MAML2Q8IZL2 1156 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR56B1Q8NGI3 324 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 OR5AR1Q8NGP9 310 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 L3HYPDHQ96EM0 354 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 INIPQ9NRY2 104 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 POLLQ9UGP5 575 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PSORS1C1Q9UIG5 152 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 KLK4Q9Y5K2 254 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CLDN7O95471 211 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 CTXN1P60606 82 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 HBG1P69891 147 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 HBG2P69892 147 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 PRSS45Q7RTY3 260 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM102Q8N9M5 508 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 BPIFA2Q96DR5 249 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 TRAF4Q9BUZ4 470 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-216ENST00000545170 UCK1Q9HA47 277 aa8.1□□□□□ -1.11
ATXN3-216ENST00000545170 A0A087WV62 115 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 TRABD2BA6NFA1 517 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 CBX7O95931 251 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 MMP7P09237 267 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-216ENST00000545170 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 GPX3P22352 226 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 PAFAH1B3Q15102 231 aaKnown RBP8.09□□□□□ -1.11
ATXN3-216ENST00000545170 Q6ZRG5 221 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 MEPCEQ7L2J0 689 aaKnown RBP8.09□□□□□ -1.11
ATXN3-216ENST00000545170 PLPPR4Q7Z2D5 763 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 OR4K14Q8NGD5 310 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 TMED6Q8WW62 240 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 ECHDC3Q96DC8 303 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 SORT1Q99523 831 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 PRDM7Q9NQW5 492 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 LIN7CQ9NUP9 197 aaKnown RBP8.09□□□□□ -1.11
ATXN3-216ENST00000545170 CHEK1O14757 476 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 LATO43561 262 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 LGI1O95970 557 aa8.09□□□□□ -1.11
ATXN3-216ENST00000545170 PNMTP11086 282 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms