RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 RNF128Q8TEB7 428 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 DNAJA4Q8WW22 397 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FIG4Q92562 907 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RAB8BQ92930 207 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KISS1RQ969F8 398 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 VPS33AQ96AX1 596 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 EPYCQ99645 322 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SPATA9Q9BWV2 254 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 POTEKPQ9BYX7 375 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TRIM2Q9C040 744 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 NSRP1Q9H0G5 558 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TMEM185BQ9H7F4 350 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TMEM27Q9HBJ8 222 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 BCL2L10Q9HD36 194 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 A4GALTQ9NPC4 353 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FAIMQ9NVQ4 179 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FBXO34Q9NWN3 711 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FLRT3Q9NZU0 649 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 C6orf203Q9P0P8 240 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TMEM181Q9P2C4 612 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KLHL13Q9P2N7 655 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 UPB1Q9UBR1 384 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SLC9A8Q9Y2E8 581 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 MAGED1Q9Y5V3 778 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KCNE3Q9Y6H6 103 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 ARHGAP21Q5T5U3 1957 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 EXPH5Q8NEV8 1989 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 MPDZO75970 2070 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ABCA4P78363 2273 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 TMED7-TICAM2A0A0A6YYA0 188 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 NPIPA5A0A0B4J1W7 369 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 A0A0J9YW62 118 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CDHR4A6H8M9 788 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ELOA3DA6NLF2 546 aaPredicted RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CCT8L1PA6NM43 557 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 A8MVM7 634 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 FAM171A2A8MVW0 826 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 VSTM5A8MXK1 200 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 NPIPA7E9PJI5 369 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CYTIPO60759 359 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CCDC22O60826 627 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 EDF1O60869 148 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 DNAJA2O60884 412 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 GMNNO75496 209 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 TNFSF13O75888 250 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 RAF1P04049 648 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 GSNP06396 782 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 NPIPA8P0DM63 369 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 BMP4P12644 408 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 PSMB1P20618 241 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 IL12AP29459 219 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 PRKAR1BP31321 381 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 DIO1P49895 249 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ARFIP2P53365 341 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CASP9P55211 416 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 DLX5P56178 289 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 OR2B6P58173 313 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 PHC1P78364 1004 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CHRNEQ04844 493 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 EPS8Q12929 822 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 FOXF2Q12947 444 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ITGADQ13349 1161 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CDSNQ15517 529 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 TAF11Q15544 211 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 SYPL1Q16563 259 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CYP51A1Q16850 503 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ELOA3BQ3SY89 546 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 TTMPQ5BVD1 217 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 COQ5Q5HYK3 327 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 MRPL2Q5T653 305 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 FAM219BQ5XKK7 198 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 TMEM225Q6GV28 225 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 POMZP3Q6PJE2 187 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 KLHL24Q6TFL4 600 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CBLN3Q6UW01 205 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 DNAJC14Q6Y2X3 702 aaPredicted RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 C20orf204Q6ZNR8 217 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 Q6ZT83 130 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 CXXC5Q7LFL8 322 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 BTLAQ7Z6A9 289 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ARPINQ7Z6K5 226 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ZAR1Q86SH2 424 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 PATL1Q86TB9 770 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 GGNQ86UU5 652 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ARMC8Q8IUR7 673 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ZNF295-AS1Q8N0V1 137 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 HIPK4Q8NE63 616 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 FAM71CQ8NEG0 241 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ELOA3Q8NG57 546 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 LINC01560Q8TB33 94 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 PNPT1Q8TCS8 783 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 STK35Q8TDR2 534 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 SLC38A5Q8WUX1 472 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 GTF2H4Q92759 462 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 GTPBP3Q969Y2 492 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 APH1AQ96BI3 265 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ZBTB9Q96C00 473 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 RADILQ96JH8 1075 aa5.01□□□□□ -1.61
CLSTN3-215ENST00000544584 ADGRG7Q96K78 797 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms