RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SLIRP	Q9GZT3	109 aa	Known RBP	5.82	□□□□□ -1.48
CIT-213	ENST00000543324	SHARPIN	Q9H0F6	387 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	DSN1	Q9H410	356 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	ALG2	Q9H553	416 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	NTN4	Q9HB63	628 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	DIABLO	Q9NR28	239 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.82	□□□□□ -1.48
CIT-213	ENST00000543324	FARSB	Q9NSD9	589 aa	Known RBP	5.82	□□□□□ -1.48
CIT-213	ENST00000543324	FAM118A	Q9NWS6	357 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	CNIH4	Q9P003	139 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	SPRR3	Q9UBC9	169 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF229	Q9UJW7	825 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	ERVK-19	Q9WJR5	959 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	DTX4	Q9Y2E6	619 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	PMF1-BGLAP	U3KQ54	211 aa		5.82	□□□□□ -1.48
CIT-213	ENST00000543324	LOC105371267	A0A1B0GV96	52 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324		A0A1W2PP18	115 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SERTM1	A2A2V5	107 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	METTL15	A6NJ78	407 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GLOD5	A6NK44	160 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324		G3V3Y1	287 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	TCF21	O43680	179 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	WDR1	O75083	606 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GUCY1B2	O75343	617 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	KCNK2	O95069	426 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CBX7	O95931	251 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	OTC	P00480	354 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PDYN	P01213	254 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GBA	P04062	536 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GLI4	P10075	376 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	HSD3B1	P14060	373 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CPM	P14384	443 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PRKCA	P17252	672 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ITGA2	P17301	1181 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	HSD3B2	P26439	372 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	TLX1	P31314	330 aa	Predicted RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SSTR4	P31391	388 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PIGA	P37287	484 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DDOST	P39656	456 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ADH7	P40394	386 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PTGDS	P41222	190 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ISL1	P61371	349 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RAE1	P78406	368 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF45	Q02386	682 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	EMX2	Q04743	252 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PRKCD	Q05655	676 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CRYZ	Q08257	329 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	MAP4K2	Q12851	820 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RCAN2	Q14206	197 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CDK10	Q15131	360 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RPS6KA2	Q15349	733 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DUSP7	Q16829	419 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CYP51A1	Q16850	503 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PGS1	Q32NB8	556 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	UGT3A2	Q3SY77	523 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GXYLT1	Q4G148	440 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF678	Q5SXM1	525 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SLC22A10	Q63ZE4	541 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	LAIR2	Q6ISS4	152 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	POMZP3	Q6PJE2	187 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	TBPL2	Q6SJ96	375 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SEM1	Q6ZVN7	128 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	P2RY8	Q86VZ1	359 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GALNT12	Q8IXK2	581 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DPP10	Q8N608	796 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	MEIOB	Q8N635	442 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CCNYL1	Q8N7R7	359 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ASCC1	Q8N9N2	400 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SPERT	Q8NA61	448 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GRPEL2	Q8TAA5	225 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	NEIL3	Q8TAT5	605 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SPPL2A	Q8TCT8	520 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ZNF675	Q8TD23	568 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RIT1	Q92963	219 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	HGD	Q93099	445 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	TM4SF18	Q96CE8	201 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RBM18	Q96H35	190 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CCDC115	Q96NT0	180 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	MBOAT4	Q96T53	435 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CCL19	Q99731	98 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RBM4B	Q9BQ04	359 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	KCTD14	Q9BQ13	255 aa	Predicted RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	TTYH2	Q9BSA4	534 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	RBM4	Q9BWF3	364 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ANGPTL4	Q9BY76	406 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	REG4	Q9BYZ8	158 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GABARAPL1	Q9H0R8	117 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DEFB127	Q9H1M4	99 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DUSP21	Q9H596	190 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	KAT8	Q9H7Z6	458 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	MARCH7	Q9H992	704 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	ZFP64	Q9NPA5	681 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CCNB1IP1	Q9NPC3	277 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	SIRT5	Q9NXA8	310 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	MAT2B	Q9NZL9	334 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	CCDC59	Q9P031	241 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	GMPR2	Q9P2T1	348 aa	Known RBP	5.81	□□□□□ -1.48
CIT-213	ENST00000543324	DNAJB9	Q9UBS3	223 aa		5.81	□□□□□ -1.48
CIT-213	ENST00000543324	WARS2	Q9UGM6	360 aa	Known RBP	5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms