RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 OR10D3Q8NH80 312 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 DNAJA4Q8WW22 397 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 TPD52L3Q96J77 140 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 MCHR1Q99705 422 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 TMEM27Q9HBJ8 222 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 PAQR5Q9NXK6 330 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 CLCF1Q9UBD9 225 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 RELNP78509 3460 aa15.38■□□□□ 0.05
RABGGTA-203ENST00000543002 GCN1Q92616 2671 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 TENM4Q6N022 2769 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 TMEM72A0PK05 275 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 GYG2O15488 501 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ZNF208O43345 1280 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ZNF682O95780 498 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 LDLRP01130 860 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 TNFRSF1BP20333 461 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 CXCR1P25024 350 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 SLC7A1P30825 629 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 EIF1AXP47813 144 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 CLK1P49759 484 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ADORA2A-AS1P86434 159 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 PMPCAQ10713 525 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 BNIP2Q12982 314 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 OR1Q1Q15612 314 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 SGCBQ16585 318 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 HBMQ6B0K9 141 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ATG4DQ86TL0 474 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 OR10Q1Q8NGQ4 319 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 OSTF1Q92882 214 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 WNT2BQ93097 391 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ZNF845Q96IR2 970 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 BTBD10Q9BSF8 475 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 PCDHAC1Q9H158 963 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 COQ10BQ9H8M1 238 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 C12orf10Q9HB07 376 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 RPS6KA6Q9UK32 745 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 ZNF175Q9Y473 711 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
RABGGTA-203ENST00000543002 PHF3Q92576 2039 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 A0A1W2PNR3 127 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 MBD3L4A6NDZ8 208 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 MBD3L3A6NE82 208 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 WIPF3A6NGB9 483 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 MBD3L5A6NJ08 208 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 ARPC2O15144 300 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 CXCL13O43927 109 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 ATP5HO75947 161 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 TFPIP10646 304 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 CCNA2P20248 432 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 TIMP3P35625 211 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 OR1E2P47887 323 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 CARD18P57730 90 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 RIPPLY2Q5TAB7 128 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 ZNF613Q6PF04 617 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 ULK3Q6PHR2 472 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 MBD3L2Q8NHZ7 208 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 RND1Q92730 232 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 OR5B2Q96R09 309 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 THTPAQ9BU02 230 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 DCAF13Q9NV06 445 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 DIDO1Q9BTC0 2240 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-203ENST00000543002 A0A0B4J2E0 115 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 A0A1B0GX12 115 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SLC22A20A6NK97 555 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 ZG16O60844 167 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 PDE5AO76074 875 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 TOXO94900 526 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 CEACAM8P31997 349 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 RASSF2P50749 326 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SMSP52788 366 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 PON3Q15166 354 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 IFI44LQ53G44 452 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 ALG10BQ5I7T1 473 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 ENTPD8Q5MY95 495 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 TMPPEQ6ZT21 453 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 FKBP9P1Q75LS8 142 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 VTCN1Q7Z7D3 282 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SSC4DQ8WTU2 575 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SLC38A4Q969I6 547 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 DDIT4LQ96D03 193 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SLC47A1Q96FL8 570 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 HSH2DQ96JZ2 352 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 ARL5BQ96KC2 179 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 NSMCE2Q96MF7 247 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 TM9SF2Q99805 663 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 MUC13Q9H3R2 512 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 TIGARQ9NQ88 270 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SELENONQ9NZV5 590 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 ACTR3BQ9P1U1 418 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 SAMD4AQ9UPU9 718 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 HDGFL3Q9Y3E1 203 aa15.35■□□□□ 0.05
RABGGTA-203ENST00000543002 USP9XQ93008 2570 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 ELOA3DA6NLF2 546 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 CPSF4LA6NMK7 179 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 A8MVM7 634 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 SYNGR4O95473 234 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 TGM6O95932 706 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 PNMTP11086 282 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms