RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	ZMYND19	Q96E35	227 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	HAO2	Q9NYQ3	351 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	KCNE5	Q9UJ90	142 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	MUC22	E2RYF6	1773 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	KHNYN	O15037	678 aa	Known RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	OGG1	O15527	345 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	HRG	P04196	525 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	ADRB1	P08588	477 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	CCR9	P51686	369 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	ID2	Q02363	134 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	POU4F2	Q12837	409 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	UBE2Q1	Q7Z7E8	422 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	OR11G2	Q8NGC1	345 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	PELI1	Q96FA3	418 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	TOX2	Q96NM4	488 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	TNFRSF13C	Q96RJ3	184 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	DDO	Q99489	341 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	GSX2	Q9BZM3	304 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	HRASLS	Q9HDD0	168 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	INSL6	Q9Y581	213 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	PTP4A3	O75365	173 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	UCHL1	P09936	223 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	DRD3	P35462	400 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	VEGFC	P49767	419 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	TAGLN	Q01995	201 aa	Known RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	FAM69A	Q5T7M9	428 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF425	Q6IV72	752 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	FIGNL1	Q6PIW4	674 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	OVCH1	Q7RTY7	1134 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	VN1R4	Q7Z5H5	301 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	FAM98A	Q8NCA5	519 aa	Known RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	ZCCHC10	Q8TBK6	192 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	DERL3	Q96Q80	235 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	TIMM29	Q9BSF4	260 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	CCDC86	Q9H6F5	360 aa	Known RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	RDH8	Q9NYR8	311 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	EMC3	Q9P0I2	261 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	KLF15	Q9UIH9	416 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	FKBP7	Q9Y680	259 aa		11.93	□□□□□ -0.5
DDX11-223	ENST00000542838	TRBV2	A0A0J9YWF9	115 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838		A0A1W2PPL8	197 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	GPR89A	B7ZAQ6	455 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	MID1	O15344	667 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	IFNG	P01579	166 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	TF	P02787	698 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	GPR89B	P0CG08	455 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	PSMB1	P20618	241 aa	Known RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	RPS4Y1	P22090	263 aa	Known RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	EDNRA	P25101	427 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	NAA10	P41227	235 aa	Predicted RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SIRPA	P78324	504 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	GAB4	Q2WGN9	574 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	TMEM255A	Q5JRV8	349 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	TCTE1	Q5JU00	501 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	HES5	Q5TA89	166 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	KANSL1	Q7Z3B3	1105 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC51B	Q86UW2	128 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	COX18	Q8N8Q8	333 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OR51L1	Q8NGJ5	315 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	TMEM27	Q9HBJ8	222 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	NRIP3	Q9NQ35	241 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	CDK2AP1	O14519	115 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	PRAF2	O60831	178 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	TGM6	O95932	706 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	PTGS2	P35354	604 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OPCML	Q14982	345 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	ADGRG3	Q86Y34	549 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SDR9C7	Q8NEX9	313 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OR4E2	Q8NGC2	313 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OR52E2	Q8NGJ4	325 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OR2T4	Q8NH00	348 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SNX33	Q8WV41	574 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	RBPMS	Q93062	196 aa	Known RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	ORAI1	Q96D31	301 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	PDCD1LG2	Q9BQ51	273 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	GNG8	Q9UK08	70 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	BAIAP2	Q9UQB8	552 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	ARPC1B	O15143	372 aa	Known RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	DNAJB6	O75190	326 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	GATB	O75879	557 aa	Known RBP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	ATP1B1	P05026	303 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	ALDOB	P05062	364 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	RPS11	P62280	158 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	METTL11B	Q5VVY1	283 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	OR52I2	Q8NH67	350 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	SEC22C	Q9BRL7	303 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	C12orf10	Q9HB07	376 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	KCMF1	Q9P0J7	381 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	HCN3	Q9P1Z3	774 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	MGAT4C	Q9UBM8	478 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	POMT2	Q9UKY4	750 aa		11.92	□□□□□ -0.5
DDX11-223	ENST00000542838	CPM	P14384	443 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ITGB8	P26012	769 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	MAT2A	P31153	395 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms