RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TCRB	P04435	133 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HLA-DPB1	P04440	258 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HEXB	P07686	556 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NR2F1	P10589	423 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	POU3F2	P20265	443 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TBXA2R	P21731	343 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TALDO1	P37837	337 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CCL7	P80098	99 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF155	Q12901	538 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC9A5	Q14940	896 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ST3GAL2	Q16842	350 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM71E1	Q6IPT2	247 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GUSBP11	Q6P575	273 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	WDR74	Q6RFH5	385 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRSS45	Q7RTY3	260 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRICKLE2	Q7Z3G6	844 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRSS42	Q7Z5A4	293 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MS4A15	Q8N5U1	240 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF527	Q8NB42	609 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR51G2	Q8NGK0	314 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GOT1L1	Q8NHS2	421 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZCCHC10	Q8TBK6	192 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KAT2A	Q92830	837 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GCDH	Q92947	438 aa	Predicted RBP	5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CACNG6	Q9BXT2	260 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TTTY10	Q9BZA0	68 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERHL2	Q9H4I8	314 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C14orf105	Q9NVL8	296 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KCMF1	Q9P0J7	381 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NTNG1	Q9Y2I2	539 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	USP34	Q70CQ2	3546 aa		5.25	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	IGHV1OR21-1	A0A087WYE8	117 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A0A1W2PPL8	197 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GLOD5	A6NK44	160 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	AGAP14	A8MT82	685 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HNRNPCL2	B2RXH8	293 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SOCS6	O14544	535 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRODH	O43272	600 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GATB	O75879	557 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HOXD4	P09016	255 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UGT2B7	P16662	529 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UQCRC2	P22695	453 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	AHR	P35869	848 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KCNJ5	P48544	419 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SELENOP	P49908	381 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C21orf58	P58505	322 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GABRE	P78334	506 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DGCR2	P98153	550 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PUDP	Q08623	228 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TCF15	Q12870	199 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CAMK2D	Q13557	499 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GPR68	Q15743	365 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TUSC1	Q2TAM9	212 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PEAR1	Q5VY43	1037 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM122C	Q6P4D5	195 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARL9	Q6T311	187 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RTL4	Q6ZR62	310 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF761	Q86XN6	746 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SIAH3	Q8IW03	269 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARIH2OS	Q8N7S6	290 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF480	Q8WV37	535 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RBPMS	Q93062	196 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	WDR89	Q96FK6	387 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RBM18	Q96H35	190 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM46A	Q96IP4	442 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TREX2	Q9BQ50	279 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	AIFM2	Q9BRQ8	373 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR52A5	Q9H2C5	316 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	METTL17	Q9H7H0	456 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DDX31	Q9H8H2	851 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MED20	Q9H944	212 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BRF2	Q9HAW0	419 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM5	Q9Y2B1	443 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NUP210	Q8TEM1	1887 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SPAAR	A0A1B0GVQ0	90 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM129	A0AVI4	362 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERTM1	A2A2V5	107 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A6NCN8	305 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		D6RAR5	112 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HMGN4	O00479	90 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GPR171	O14626	319 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NDUFS4	O43181	175 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SCRG1	O75711	98 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TNFSF15	O95150	251 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	IFNA7	P01567	189 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	WNT1	P04628	370 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ANKRD34C	P0C6C1	535 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NPPB	P16860	134 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HK1	P19367	917 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TCN2	P20062	427 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	AHCY	P23526	432 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ACP1	P24666	158 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FGF9	P31371	208 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC3A1	Q07837	685 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RAB40B	Q12829	278 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	STK11	Q15831	433 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC25A35	Q3KQZ1	300 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM98A	Q8NCA5	519 aa	Known RBP	5.24	□□□□□ -1.57

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