RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CYTIPO60759 359 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 PGM3O95394 542 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 HRGP04196 525 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 YES1P07947 543 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 ARAFP10398 606 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 PRG2P13727 222 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 UQCRBP14927 111 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 PPIBP23284 216 aaKnown RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 SLC1A3P43003 542 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 HTR3AP46098 478 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 POLR2HP52434 150 aaKnown RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 CSNK2A1P68400 391 aaPredicted RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 RASGEF1BQ0VAM2 473 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 SF3A3Q12874 501 aaKnown RBP eCLIP13.94□□□□□ -0.18
CIT-210ENST00000539413 ZNF311Q5JNZ3 666 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 GCNT6Q5T4J0 391 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 METTL21CQ5VZV1 264 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 CGB2Q6NT52 195 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 STAC2Q6ZMT1 411 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 OTOGQ6ZRI0 2925 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 BEND4Q6ZU67 534 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 C22orf34Q6ZV56 151 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 STK32CQ86UX6 486 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 RETREG3Q86VR2 466 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 NFKBIDQ8NI38 313 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 BBS10Q8TAM1 723 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 ZNF300Q96RE9 604 aaPredicted RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 CPPED1Q9BRF8 314 aaPredicted RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 SPATA9Q9BWV2 254 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 BCO1Q9HAY6 547 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 C6orf203Q9P0P8 240 aaPredicted RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 KLHL9Q9P2J3 617 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 LEF1Q9UJU2 399 aaPredicted RBP13.94□□□□□ -0.18
CIT-210ENST00000539413 ZNF232Q9UNY5 417 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 NDUFAF1Q9Y375 327 aa13.94□□□□□ -0.18
CIT-210ENST00000539413 GOSR1O95249 250 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 PMS2P2O95744 297 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
CIT-210ENST00000539413 GPX2P18283 190 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 CLK1P49759 484 aaKnown RBP13.93□□□□□ -0.18
CIT-210ENST00000539413 GUCY1A3Q02108 690 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 RUNDC3AQ59EK9 446 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 TFAP2EQ6VUC0 442 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 DHDDSQ86SQ9 333 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 SERPINA11Q86U17 422 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 CADM2Q8N3J6 435 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 ZNF775Q96BV0 537 aaPredicted RBP13.93□□□□□ -0.18
CIT-210ENST00000539413 ZC3HAV1LQ96H79 300 aaKnown RBP13.93□□□□□ -0.18
CIT-210ENST00000539413 RSPO3Q9BXY4 272 aaPredicted RBP13.93□□□□□ -0.18
CIT-210ENST00000539413 ADAM19Q9H013 955 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 IFT52Q9Y366 437 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 HDGFL3Q9Y3E1 203 aa13.93□□□□□ -0.18
CIT-210ENST00000539413 A0A1W2PPR1 153 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZC3H12DA2A288 527 aaKnown RBP13.92□□□□□ -0.18
CIT-210ENST00000539413 EVPLLA8MZ36 301 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZNF814B7Z6K7 855 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ANGPT2O15123 496 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 SIAH2O43255 324 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZNF208O43345 1280 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 FRS3O43559 492 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 VIMP08670 466 aaKnown RBP13.92□□□□□ -0.18
CIT-210ENST00000539413 IMPDH2P12268 514 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
CIT-210ENST00000539413 IST1P53990 364 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 OR2B6P58173 313 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 CDK6Q00534 326 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZSWIM7Q19AV6 140 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 HSP90B2PQ58FF3 399 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ABLIM2Q6H8Q1 611 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 MTDHQ86UE4 582 aaKnown RBP13.92□□□□□ -0.18
CIT-210ENST00000539413 DPP10Q8N608 796 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 DDIT4LQ96D03 193 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 TACO1Q9BSH4 297 aaKnown RBP13.92□□□□□ -0.18
CIT-210ENST00000539413 PLEKHF2Q9H8W4 249 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZNF226Q9NYT6 803 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 TMEM181Q9P2C4 612 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ST6GALNAC2Q9UJ37 374 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 CORO2BQ9UQ03 480 aa13.92□□□□□ -0.18
CIT-210ENST00000539413 ZNF716A6NP11 495 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 DEFB108AA8MXU0 73 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 GCM2O75603 506 aaPredicted RBP13.91□□□□□ -0.18
CIT-210ENST00000539413 THBDP07204 575 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 ETS2P15036 469 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 CRYGSP22914 178 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 EDNRAP25101 427 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 ARFIP2P53365 341 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 COPZ1P61923 177 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 HOXC5Q00444 222 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 SELPLGQ14242 412 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 TESK1Q15569 626 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 ADRM1Q16186 407 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 WBP2NLQ6ICG8 309 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 REEP3Q6NUK4 255 aa13.91□□□□□ -0.18
CIT-210ENST00000539413 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms