RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 GMEB1Q9Y692 573 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 IGKV3D-15A0A087WSY6 115 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 A0A0G2JPF8 293 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 A0A1W2PPR1 153 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 HNRNPCL2B2RXH8 293 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 HNRNPCL3B7ZW38 293 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 ZNF208O43345 1280 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 HNRNPCL1O60812 293 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 ADAM11O75078 769 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 GCM2O75603 506 aaPredicted RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 CNOT4O95628 575 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 BCHEP06276 602 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 FESP07332 822 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 HNRNPCL4P0DMR1 293 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 TFPIP10646 304 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 PPIBP23284 216 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 SLC1A3P43003 542 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 IDH2P48735 452 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 POLR2HP52434 150 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 NR1H2P55055 460 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 RASGEF1BQ0VAM2 473 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 EPS8Q12929 822 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 SQLEQ14534 574 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 LARS2Q15031 903 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 P2RY6Q15077 328 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 RGNQ15493 299 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 DEFB113Q30KQ7 82 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 BEX5Q5H9J7 111 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 LRIF1Q5T3J3 769 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 LCE2DQ5TA82 110 aaPredicted RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 NUFIP2Q7Z417 695 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 HMGN2P46Q86SG4 172 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 MTDHQ86UE4 582 aaKnown RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 FUNDC1Q8IVP5 155 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 GABRG1Q8N1C3 465 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 OR52P1PQ8NH57 321 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 CKAP2Q8WWK9 683 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 SLC35B4Q969S0 331 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 SPDL1Q96EA4 605 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 AURKBQ96GD4 344 aaPredicted RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 TMEM19Q96HH6 336 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 MAGEB18Q96M61 343 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 SIKE1Q9BRV8 207 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 ACTR6Q9GZN1 396 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 RABEP2Q9H5N1 569 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 ARMC7Q9H6L4 198 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 BCL2L10Q9HD36 194 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 A4GALTQ9NPC4 353 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 BEX4Q9NWD9 120 aaPredicted RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 C6orf203Q9P0P8 240 aaPredicted RBP10.28□□□□□ -0.76
RTN3-209ENST00000538995 TRAPPC4Q9Y296 219 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 IFT52Q9Y366 437 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 PCDHB14Q9Y5E9 798 aa10.28□□□□□ -0.76
RTN3-209ENST00000538995 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.77
RTN3-209ENST00000538995 IGHV3-15A0A0B4J1V0 119 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 CLIC1O00299 241 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 AP3D1O14617 1153 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 EIF1BO60739 113 aaKnown RBP10.27□□□□□ -0.77
RTN3-209ENST00000538995 THBDP07204 575 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 CD53P19397 219 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 OR3A2P47893 321 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 SLC2A7Q6PXP3 512 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 ZNF836Q6ZNA1 936 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 Q6ZT83 130 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 SSX8Q7RTT4 187 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 BBS10Q8TAM1 723 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 PIGXQ8TBF5 258 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 DDIT4LQ96D03 193 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 PIK3IP1Q96FE7 263 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 ZC3HAV1LQ96H79 300 aaKnown RBP10.27□□□□□ -0.77
RTN3-209ENST00000538995 ARL5BQ96KC2 179 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 SPATA9Q9BWV2 254 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 ZNF232Q9UNY5 417 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 CORO2BQ9UQ03 480 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 ZNF443Q9Y2A4 671 aaPredicted RBP10.27□□□□□ -0.77
RTN3-209ENST00000538995 HEATR5AQ86XA9 2040 aa10.27□□□□□ -0.77
RTN3-209ENST00000538995 TMED7-TICAM2A0A0A6YYA0 188 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 NR5A2O00482 541 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 GPR171O14626 319 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 FPR1P21462 350 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 IL32P24001 234 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
RTN3-209ENST00000538995 TACR3P29371 465 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 SLC16A1P53985 500 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 COPZ1P61923 177 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 ITGADQ13349 1161 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 SFRP5Q5T4F7 317 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 ANKRD34AQ69YU3 496 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 WBP2NLQ6ICG8 309 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 C20orf204Q6ZNR8 217 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 C22orf34Q6ZV56 151 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 CXorf67Q86X51 503 aaPredicted RBP10.26□□□□□ -0.77
RTN3-209ENST00000538995 VRK2Q86Y07 508 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 TGIF2LYQ8IUE0 185 aa10.26□□□□□ -0.77
RTN3-209ENST00000538995 KISS1RQ969F8 398 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms