RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PIF1Q9H611 641 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CMTM6Q9NX76 183 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MCTS1Q9ULC4 181 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HIVEP1P15822 2718 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRRC2AP48634 2157 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CHRM4P08173 479 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 UBTFL6P0CB48 400 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CD8BP10966 210 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PGM1P36871 562 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PLAURQ03405 335 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CHRNEQ04844 493 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GABPB1Q06547 395 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SCARB2Q14108 478 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ADRM1Q16186 407 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRAMEF8Q5VWM4 474 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRAMEF7Q5VXH5 474 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 REEP3Q6NUK4 255 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ERICH5Q6P6B1 374 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HMGN2P46Q86SG4 172 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DEFB107AQ8IZN7 70 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 RBM15BQ8NDT2 890 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NFKBIDQ8NI38 313 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PMM1Q92871 262 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OSTF1Q92882 214 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 REXO5Q96IC2 774 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 QRSL1Q9H0R6 528 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC38A1Q9H2H9 487 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 COQ10BQ9H8M1 238 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ADA2Q9NZK5 511 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ABCD2Q9UBJ2 740 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CLEC4AQ9UMR7 237 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ANGPT4Q9Y264 503 aa15.98■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ROS1P08922 2347 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 A0A0G2JPF8 293 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HNRNPCL2B2RXH8 293 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HNRNPCL3B7ZW38 293 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 EBAG9O00559 213 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NME4O00746 187 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HNRNPCL1O60812 293 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CYP7B1O75881 506 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HNRNPCL4P0DMR1 293 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PCYT1AP49585 367 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GZMMP51124 257 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 LIPEQ05469 1076 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BNIP1Q12981 228 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MAPK11Q15759 364 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PDSS1Q5T2R2 415 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 RINLQ6ZS11 566 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 EIF3MQ7L2H7 374 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CALHM3Q86XJ0 350 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PTOV1Q86YD1 416 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC30A8Q8IWU4 369 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF610Q8N9Z0 462 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HIPK4Q8NE63 616 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OR2T12Q8NG77 320 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BBS10Q8TAM1 723 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GMPPAQ96IJ6 420 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF583Q96ND8 569 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DACH2Q96NX9 599 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SRXN1Q9BYN0 137 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C1orf21Q9H246 121 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CACYBPQ9HB71 228 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BCL2L10Q9HD36 194 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TMEM181Q9P2C4 612 aa15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF469Q96JG9 3925 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SH3D21A4FU49 640 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CLDN24A6NM45 220 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FAM220BPB1ANY3 271 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SS18L1O75177 396 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ATP5HO75947 161 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PGM3O95394 542 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SYNGR4O95473 234 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DNAJA1P31689 397 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CCKARP32238 428 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PCGF2P35227 344 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CD79BP40259 229 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CARD18P57730 90 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SELENBP1Q13228 472 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TESK1Q15569 626 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF239Q16600 458 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 VMACQ2NL98 169 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TMEM176BQ3YBM2 270 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 RPS26P11Q5JNZ5 115 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CDC20BQ86Y33 519 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ROBO4Q8WZ75 1007 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 LIME1Q9H400 295 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ALG2Q9H553 416 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PROCRQ9UNN8 238 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC35A3Q9Y2D2 325 aa15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MAP1AP78559 2803 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ADAM11O75078 769 aa15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 RASSF2P50749 326 aa15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SESN3P58005 492 aa15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 KCNJ10P78508 379 aa15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 SAMD4BQ5PRF9 694 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 INTS11Q5TA45 600 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 KRT73Q86Y46 540 aa15.95■□□□□ 0.14
TNFRSF1A-209ENST00000536717 PEX5LQ8IYB4 626 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms