RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SLC46A2Q9BY10 475 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 DNTTIP1Q9H147 329 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 SLC25A32Q9H2D1 315 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 HEXA-AS1Q9H8Q6 139 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 A4GALTQ9NPC4 353 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 INPP5EQ9NRR6 644 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 AHSPQ9NZD4 102 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 ABRACLQ9P1F3 81 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 MALT1Q9UDY8 824 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 KLF2Q9Y5W3 355 aaPredicted RBP6.1□□□□□ -1.43
USP28-202ENST00000535607 NPTNQ9Y639 398 aa6.1□□□□□ -1.43
USP28-202ENST00000535607 CEP290O15078 2479 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 TRAV6A0A075B6T7 132 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 TRBV5-4A0A0C4DH59 114 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 A0A1B0GUH1 482 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 A0A1W2PRQ8 180 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PQLC2LA1A4F0 135 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 POM121BA6NF01 834 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 OR6C65A6NJZ3 312 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 GABRR3A8MPY1 467 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 IQCF5A8MTL0 148 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 HMSDA8MTL9 139 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SNRPGP15A8MWD9 76 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 D6RAR5 112 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 GABRPO00591 440 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PDCD5O14737 125 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 CTDSPLO15194 276 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 EEF1E1O43324 174 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 GSTZ1O43708 216 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 PCDH7O60245 1069 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PTP4A3O75365 173 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 AQP8O94778 261 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ABHD16AO95870 558 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 EGFP01133 1207 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 IGLV3-27P01718 113 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SERPIND1P05546 499 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 S100A6P06703 90 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ADRB1P08588 477 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SRCP12931 536 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ETFAP13804 333 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 CPN1P15169 458 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ELK1P19419 428 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PAICSP22234 425 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 IDSP22304 550 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 NFYAP23511 347 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 TIA1P31483 386 aaKnown RBP eCLIP6.09□□□□□ -1.43
USP28-202ENST00000535607 OR1D2P34982 312 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 FAUP35544 74 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 SOAT1P35610 550 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ACVRL1P37023 503 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 OR1E2P47887 323 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SLC6A12P48065 614 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 FABP5Q01469 135 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 LGALS3BPQ08380 585 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ZNF763Q0D2J5 394 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 C2orf80Q0P641 193 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SNTB2Q13425 540 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 ZSWIM7Q19AV6 140 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 GSG1Q2KHT4 349 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SYT14P1Q58G82 188 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 FAM219BQ5XKK7 198 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 RAET1GQ6H3X3 334 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 UQCC3Q6UW78 93 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PRSS55Q6UWB4 352 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 ZNF551Q7Z340 670 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 SLC9B2Q86UD5 537 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 GID4Q8IVV7 300 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 FAM217AQ8IXS0 508 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SPAG16Q8N0X2 631 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PNPLA1Q8N8W4 532 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 MRPL43Q8N983 215 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 GPR26Q8NDV2 337 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 OR11H7Q8NGC8 314 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 OR8D4Q8NGM9 314 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 HUS1BQ8NHY5 278 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SPPL3Q8TCT6 385 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SLC7A13Q8TCU3 470 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 POF1BQ8WVV4 589 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 OSTF1Q92882 214 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 RIT1Q92963 219 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ELP4Q96EB1 424 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SIPA1Q96FS4 1042 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 ZNF354BQ96LW1 612 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 C10orf90Q96M02 699 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 CDCA3Q99618 268 aaPredicted RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 SLC19A3Q9BZV2 496 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 RERGLQ9H628 205 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 TBC1D17Q9HA65 648 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 CACYBPQ9HB71 228 aaKnown RBP6.09□□□□□ -1.43
USP28-202ENST00000535607 SGK2Q9HBY8 427 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 BPIFA1Q9NP55 256 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 B3GAT2Q9NPZ5 323 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 TRIM36Q9NQ86 728 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 GKN1Q9NS71 199 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 KCNE5Q9UJ90 142 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 SLC13A4Q9UKG4 626 aa6.09□□□□□ -1.43
USP28-202ENST00000535607 PPIEQ9UNP9 301 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms